RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ST8SIA1Q92185 356 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF566Q969W8 418 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 BPIFA2Q96DR5 249 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 FER1L6-AS2Q96M78 137 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 GPA33Q99795 319 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 MRPS26Q9BYN8 205 aaKnown RBP6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 RTN4RQ9BZR6 473 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ADNPQ9H2P0 1102 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC25A19Q9HC21 320 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 CPNE5Q9HCH3 593 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 HPF1Q9NWY4 346 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 TUBA8Q9NY65 449 aaPredicted RBP6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 CNIH4Q9P003 139 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 PPP4R1LQ9P1A2 415 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ABI3Q9P2A4 366 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 TEKT2Q9UIF3 430 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 WIF1Q9Y5W5 379 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 EPG5Q9HCE0 2579 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 SPTBP11277 2137 aa6.88□□□□□ -1.31
PTP4A1-206ENST00000627002 ACACBO00763 2458 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CEP250Q9BV73 2442 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CACNA1GO43497 2377 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ASCC3Q8N3C0 2202 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 A0A087WXM4 84 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM8BA6NDV4 472 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TRIM64A6NGJ6 449 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 EFCAB9A8MZ26 197 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CDK2AP1O14519 115 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ADAM10O14672 748 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 HCN1O60741 890 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 RCBTB2O95199 551 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SOX14O95416 240 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SAGP10523 405 aaPredicted RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CXCR1P25024 350 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ELK4P28324 431 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TACR3P29371 465 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 GPR4P46093 362 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 GIPRP48546 466 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC9A3P48764 834 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 GABARAPL2P60520 117 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TUBA4AP68366 448 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CDK5Q00535 292 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CRYZQ08257 329 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 Q0VFX4 171 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 AIMP2Q13155 320 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 GINS1Q14691 196 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 QPRTQ15274 297 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 COL28A1Q2UY09 1125 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CTU2Q2VPK5 515 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ACER2Q5QJU3 275 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 C12orf73Q69YU5 71 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 FCRLBQ6BAA4 426 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 C5orf46Q6UWT4 87 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 IL20RBQ6UXL0 311 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 UNQ6494/PRO21346Q6UXR6 183 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CASP12Q6UXS9 341 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF620Q6ZNG0 422 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 RTL4Q6ZR62 310 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 GRINAQ7Z429 371 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 KIF18BQ86Y91 864 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 MARCH9Q86YJ5 346 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CCDC71Q8IV32 467 aaPredicted RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 P3H2Q8IVL5 708 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ENTHD1Q8IYW4 607 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 AMER2Q8N7J2 671 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CLEC1AQ8NC01 280 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 OR52L1Q8NGH7 329 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 RHOXF1Q8NHV9 184 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 FANK1Q8TC84 345 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 BRIX1Q8TDN6 353 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 PAQR8Q8TEZ7 354 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 NXPE2Q96DL1 559 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SGTBQ96EQ0 304 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 THOC3Q96J01 351 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SGCZQ96LD1 299 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC38A2Q96QD8 506 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 DPH1Q9BZG8 443 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 NDEL1Q9GZM8 345 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 DSN1Q9H410 356 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TBC1D23Q9NUY8 699 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SCN3BQ9NY72 215 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TAS2R10Q9NYW0 307 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 IL20Q9NYY1 176 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 IL17BQ9UHF5 180 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 ZMIZ1Q9ULJ6 1067 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 RNF6Q9Y252 685 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 TPRKBQ9Y3C4 175 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 MRPS18BQ9Y676 258 aaKnown RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CHCHD2Q9Y6H1 151 aaPredicted RBP6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 CDH10Q9Y6N8 788 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 FER1L5A0AVI2 2057 aa6.87□□□□□ -1.31
PTP4A1-206ENST00000627002 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms