RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TMPRSS13Q9BYE2 586 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 ROPN1BQ9BZX4 212 aaPredicted RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 ROPN1Q9HAT0 212 aaPredicted RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 NTN4Q9HB63 628 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 DDX18Q9NVP1 670 aaKnown RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 DNAH3Q8TD57 4116 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 HMX2A2RU54 273 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 MYO1GB0I1T2 1018 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 hCG_2039718K7EN88 272 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 KLF11O14901 512 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 KLHL2O95198 593 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 TFP02787 698 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 RBP1P09455 135 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 SAGP10523 405 aaPredicted RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 GCAP28676 217 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 RAE1P78406 368 aaKnown RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 ZNF117Q03924 483 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 ABLIM2Q6H8Q1 611 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 CBLN3Q6UW01 205 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 TIFABQ6ZNK6 161 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 LCA5Q86VQ0 697 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 MISPQ8IVT2 679 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 C17orf78Q8N4C9 275 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 ZNF527Q8NB42 609 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 GPR151Q8TDV0 419 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 EPS8L3Q8TE67 593 aaKnown RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 LRRC58Q96CX6 371 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 NSUN5Q96P11 429 aaKnown RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 EMC3Q9P0I2 261 aa12.01□□□□□ -0.49
SNX1-214ENST00000625244 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 TNPO3Q9Y5L0 923 aaKnown RBP12.01□□□□□ -0.49
SNX1-214ENST00000625244 TMEM129A0AVI4 362 aa12□□□□□ -0.49
SNX1-214ENST00000625244 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
SNX1-214ENST00000625244 H6PDO95479 791 aa12□□□□□ -0.49
SNX1-214ENST00000625244 NUDT14O95848 222 aa12□□□□□ -0.49
SNX1-214ENST00000625244 PRKCAP17252 672 aa12□□□□□ -0.49
SNX1-214ENST00000625244 PRTN3P24158 256 aa12□□□□□ -0.49
SNX1-214ENST00000625244 GCH1P30793 250 aa12□□□□□ -0.49
SNX1-214ENST00000625244 SLC1A3P43003 542 aa12□□□□□ -0.49
SNX1-214ENST00000625244 MAGEA12P43365 314 aa12□□□□□ -0.49
SNX1-214ENST00000625244 GPR6P46095 362 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 RNF144AP50876 292 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 PRPS1P60891 318 aa12□□□□□ -0.49
SNX1-214ENST00000625244 LMO4P61968 165 aa12□□□□□ -0.49
SNX1-214ENST00000625244 SELENBP1Q13228 472 aa12□□□□□ -0.49
SNX1-214ENST00000625244 ADRM1Q16186 407 aa12□□□□□ -0.49
SNX1-214ENST00000625244 KRT71Q3SY84 523 aa12□□□□□ -0.49
SNX1-214ENST00000625244 CENPLQ8N0S6 344 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 SIGLECL1Q8N7X8 197 aa12□□□□□ -0.49
SNX1-214ENST00000625244 C1orf162Q8NEQ5 155 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 OR4F6Q8NGB9 312 aa12□□□□□ -0.49
SNX1-214ENST00000625244 RHEBL1Q8TAI7 183 aa12□□□□□ -0.49
SNX1-214ENST00000625244 NANPQ8TBE9 248 aa12□□□□□ -0.49
SNX1-214ENST00000625244 C16orf78Q8WTQ4 265 aa12□□□□□ -0.49
SNX1-214ENST00000625244 SELENOMQ8WWX9 145 aa12□□□□□ -0.49
SNX1-214ENST00000625244 ELP4Q96EB1 424 aa12□□□□□ -0.49
SNX1-214ENST00000625244 C1orf147Q96MC9 270 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 OR5B2Q96R09 309 aa12□□□□□ -0.49
SNX1-214ENST00000625244 TPK1Q9H3S4 243 aa12□□□□□ -0.49
SNX1-214ENST00000625244 GLIPR2Q9H4G4 154 aa12□□□□□ -0.49
SNX1-214ENST00000625244 BRF2Q9HAW0 419 aa12□□□□□ -0.49
SNX1-214ENST00000625244 EQTNQ9NQ60 294 aa12□□□□□ -0.49
SNX1-214ENST00000625244 DCTN4Q9UJW0 460 aa12□□□□□ -0.49
SNX1-214ENST00000625244 TMCO1Q9UM00 188 aa12□□□□□ -0.49
SNX1-214ENST00000625244 ICAM5Q9UMF0 924 aa12□□□□□ -0.49
SNX1-214ENST00000625244 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
SNX1-214ENST00000625244 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
SNX1-214ENST00000625244 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 ZNF716A6NP11 495 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 PCDH7O60245 1069 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 SMIM24O75264 130 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 PRSS23O95084 383 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 MYZAPP0CAP1 466 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 HPGDP15428 266 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 MDKP21741 143 aaPredicted RBP11.99□□□□□ -0.49
SNX1-214ENST00000625244 MAP3K8P41279 467 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 PDK3Q15120 406 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 GGTA1PQ4G0N0 100 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 IKBIPQ70UQ0 350 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 HOXB13Q92826 284 aaPredicted RBP11.99□□□□□ -0.49
SNX1-214ENST00000625244 SLC38A2Q96QD8 506 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 KCNS3Q9BQ31 491 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 IQCGQ9H095 443 aaKnown RBP11.99□□□□□ -0.49
SNX1-214ENST00000625244 MMP27Q9H306 513 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 SLC52A3Q9NQ40 469 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 UBQLN4Q9NRR5 601 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
SNX1-214ENST00000625244 VPS29Q9UBQ0 182 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 ZDHHC2Q9UIJ5 367 aa11.99□□□□□ -0.49
SNX1-214ENST00000625244 GNG14A0A1W2PPG7 69 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 A0A1W2PQD3 144 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 SCDO00767 359 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 RGS16O15492 202 aaPredicted RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 GLRA3O75311 464 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 MRPL33O75394 65 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms