RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 KLF15Q9UIH9 416 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 LAMA2P24043 3122 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 CHURC1-FNTBB4DL54 471 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 GABARAPH6UMI1 98 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 ZNF749O43361 778 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 LCMT2O60294 686 aaKnown RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 KHDRBS3O75525 346 aaKnown RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 ARL6IP5O75915 188 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 KRT33AO76009 404 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PLATP00750 562 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 GNRH1P01148 92 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 APOC3P02656 99 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 STATHP02808 62 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PPP3CBP16298 524 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 MAKP20794 623 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PDX1P52945 283 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CAMK1Q14012 370 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 GK2Q14410 553 aaPredicted RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 ZNF805Q5CZA5 627 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CLVS2Q5SYC1 327 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 C9orf64Q5T6V5 341 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 FAAP20Q6NZ36 180 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 ADIPOR2Q86V24 386 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PDZD9Q8IXQ8 264 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 RFLNBQ8N5W9 214 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 MRPS24Q96EL2 167 aaKnown RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 DTD2Q96FN9 168 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PEX11GQ96HA9 241 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 HS6ST2Q96MM7 605 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 DEFB118Q96PH6 123 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 OR52A5Q9H2C5 316 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 CMC2Q9NRP2 79 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CALML5Q9NZT1 146 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 KLHL9Q9P2J3 617 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 IL36AQ9UHA7 158 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PCDHGA5Q9Y5G8 931 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 FAM86C2PA6NEL3 165 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 D6RAR5 112 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 SELENOFO60613 162 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 LDOC1O95751 146 aaPredicted RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 UCHL1P09936 223 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 BMP7P18075 431 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 MC3RP41968 323 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 ARFIP1P53367 373 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 ERVK-21P61565 698 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 B2MP61769 119 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PRR5P85299 388 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 TP53I3Q53FA7 332 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 TMEM215Q68D42 235 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 FAM199XQ6PEV8 388 aaPredicted RBP13.06□□□□□ -0.32
LDB3-209ENST00000623056 OVCH1Q7RTY7 1134 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CLRN3Q8NCR9 226 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 NUP43Q8NFH3 380 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PFN4Q8NHR9 129 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 MOAP1Q96BY2 351 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 SCLYQ96I15 445 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CMTM3Q96MX0 182 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 CD180Q99467 661 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 PRELID3BQ9Y3B1 194 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
LDB3-209ENST00000623056 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 MAGEB4O15481 346 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 EMC8O43402 210 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 SLC2A5P22732 501 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 GDI2P50395 445 aaKnown RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 FOXK2Q01167 660 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 OLFML2AQ68BL7 652 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 THSD4Q6ZMP0 1018 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 SERPINA12Q8IW75 414 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 TCEAL8Q8IYN2 117 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 SLC25A38Q96DW6 304 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 LINC00615Q96LM1 132 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 OR14A2Q96R54 314 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 KLHL31Q9H511 634 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 C20orf141Q9NUB4 165 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 ZNF223Q9UK11 482 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 FBXL4Q9UKA2 621 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 PCYT1BQ9Y5K3 369 aaPredicted RBP13.05□□□□□ -0.32
LDB3-209ENST00000623056 FXYD6-FXYD2A0A087WZ82 144 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 A0A1W2PR48 441 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 HMSDA8MTL9 139 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 SDC3O75056 442 aa13.05□□□□□ -0.32
LDB3-209ENST00000623056 KDM4BO94953 1096 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms