RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SLC29A1Q99808 456 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 PRSS27Q9BQR3 290 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 VCXQ9H320 206 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 Q9H521 79 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 MED17Q9NVC6 651 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SCOCQ9UIL1 159 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 FREM3P0C091 2139 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 NCKAP5O14513 1909 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 A0A087WUU8 490 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 C7orf72A4D263 438 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 PINLYPA6NC86 204 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ELOA3DA6NLF2 546 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 EI24O14681 340 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 RASAL1O95294 804 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 TACR3P29371 465 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 PDK3Q15120 406 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 TBR1Q16650 682 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ELOA3BQ3SY89 546 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF766Q5HY98 468 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 RRM2BQ7LG56 351 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 GALNTL5Q7Z4T8 443 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 LSRQ86X29 649 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 PACRGLQ8N7B6 248 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ELOA3Q8NG57 546 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 OR4K5Q8NGD3 323 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 OR9Q2Q8NGE9 314 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ACOT11Q8WXI4 607 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ST8SIA1Q92185 356 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 TM9SF4Q92544 642 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 C1GALT1C1Q96EU7 318 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 MPP4Q96JB8 637 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 ADAM19Q9H013 955 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 GABARAPL1Q9H0R8 117 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 SMURF2Q9HAU4 748 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 KIF17Q9P2E2 1029 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 BOKQ9UMX3 212 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 CSAG2Q9Y5P2 127 aa16.18■□□□□ 0.18
PTCHD3-202ENST00000622555 DPPA5A6NC42 116 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 LRRC3CA6NJW4 275 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 EIF4E1BA6NMX2 242 aaKnown RBP16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 MKRN2OSH3BPM6 223 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 OR10H3O60404 316 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 CBR3O75828 277 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 PNMTP11086 282 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 PRKCAP17252 672 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 TCEA1P23193 301 aaKnown RBP16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 POMZP3Q6PJE2 187 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 GRINAQ7Z429 371 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 ATG4DQ86TL0 474 aaPredicted RBP16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 ZADH2Q8N4Q0 377 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 TMEM178AQ8NBL3 297 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 DKKL1Q9UK85 242 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 AP4B1Q9Y6B7 739 aa16.17■□□□□ 0.18
PTCHD3-202ENST00000622555 A0A087WUJ7 227 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 TMEM8BA6NDV4 472 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 KLRC4-KLRK1H3BQV0 150 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 DPP4P27487 766 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 POLR2HP52434 150 aaKnown RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 MERTKQ12866 999 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 FOXF1Q12946 379 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 DAG1Q14118 895 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 PLPPR5Q32ZL2 321 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 ANKRD34AQ69YU3 496 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 LINC00471Q8N535 108 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 ATG16L2Q8NAA4 619 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 TMEM239Q8WW34 195 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 EXTL1Q92935 676 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 SCMH1Q96GD3 660 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 HS6ST2Q96MM7 605 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 FEVQ99581 238 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 RBM4BQ9BQ04 359 aaKnown RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 RBM4Q9BWF3 364 aaKnown RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 ZFP64Q9NPA5 681 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 C8orf4Q9NR00 106 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 OSGIN1Q9UJX0 560 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 ARRDC5A6NEK1 342 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 CCNA2P20248 432 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 CXCR1P25024 350 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 RBM34P42696 430 aaKnown RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 HTR3AP46098 478 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 CD97P48960 835 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 MEOX1P50221 254 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 UGT2B15P54855 530 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 DSCR4P56555 118 aaPredicted RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 LSM11P83369 360 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 FOXO1Q12778 655 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 TOMM20Q15388 145 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 TTC33Q6PID6 262 aaPredicted RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 LINC00114Q6XXX2 140 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 MBOAT2Q6ZWT7 520 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 AQP11Q8NBQ7 271 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 PIGXQ8TBF5 258 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 SNRNP27Q8WVK2 155 aaKnown RBP16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 OSBPL10Q9BXB5 764 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 C12orf10Q9HB07 376 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 UBAP1Q9NZ09 502 aa16.16■□□□□ 0.18
PTCHD3-202ENST00000622555 A0A087WZY1 265 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 TRAV17A0A0B4J275 112 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms