RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DEFB110Q30KQ9 67 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 ZNF542PQ5EBM4 170 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 ARMC6Q6NXE6 501 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 PARGQ86W56 976 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 ZNF761Q86XN6 746 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 SMPDL3BQ92485 455 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 TOE1Q96GM8 510 aaKnown RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 GDF15Q99988 308 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 TTYH2Q9BSA4 534 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 LRRC61Q9BV99 259 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDPN-212ENST00000621990 UCK1Q9HA47 277 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 ICAM5Q9UMF0 924 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 NOX1Q9Y5S8 564 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 A0A0A6YYC8 382 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 I3L1I5 382 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 ZNF749O43361 778 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CT45A8P0DMV1 189 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CT45A9P0DMV2 189 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CLUP10909 449 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TYRP1P17643 537 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ELK1P19419 428 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MYL9P24844 172 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GABRA4P48169 554 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 BLKP51451 505 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ATP12AP54707 1039 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 E2F1Q01094 437 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FUT7Q11130 342 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDPN-212ENST00000621990 CT45A2Q5DJT8 189 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FCRLBQ6BAA4 426 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FAAH2Q6GMR7 532 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TMEM53Q6P2H8 277 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ZC3H14Q6PJT7 736 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 KIRREL2Q6UWL6 708 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 LRRC28Q86X40 367 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 FRMD1Q8N878 549 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 AVL9Q8NBF6 648 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RCBTB1Q8NDN9 531 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 NLGN4YQ8NFZ3 816 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 OR5M3Q8NGP4 307 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ABHD4Q8TB40 342 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 OIT3Q8WWZ8 545 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SLC7A6Q92536 515 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ARSGQ96EG1 525 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TCTN2Q96GX1 697 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 C4orf36Q96KX1 117 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FRMD6Q96NE9 622 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TBX5Q99593 518 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 OR51V1Q9H2C8 321 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FBXL4Q9UKA2 621 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 CEP290O15078 2479 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 A0A0G2JK05 382 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 A0A1W2PPC4 97 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 NSA2O95478 260 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 IGF2P01344 180 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GSTT2BP0CG30 244 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CTSEP14091 401 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GALNSP34059 522 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FASLGP48023 281 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RFX3P48380 749 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 NRG3P56975 720 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 IL18Q14116 193 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ISXQ2M1V0 245 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 POMGNT2Q8NAT1 580 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 C19orf18Q8NEA5 215 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 C17orf47Q8NEP4 570 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MSANTD3Q96H12 275 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RBM18Q96H35 190 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 PEX11GQ96HA9 241 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 DDOQ99489 341 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 WSB2Q9NYS7 404 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 ST6GALNAC2Q9UJ37 374 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 KLHL21Q9UJP4 597 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 A0A087WUJ7 227 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 LINC00854A0A1B0GVQ3 168 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SLC9B1P1A6NJY1 282 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TFECO14948 347 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 NDUFB2O95178 105 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CLPSP04118 112 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CD1AP06126 327 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MRPL3P09001 348 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 CAPZBP47756 277 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GPR143P51810 404 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 RPS4XP62701 263 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 DAB2P98082 770 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CSTF1Q05048 431 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 CRYZQ08257 329 aaKnown RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 STX4Q12846 297 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SF3B4Q15427 424 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDPN-212ENST00000621990 SF3A2Q15428 464 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms