RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 A0A1B0GWA3 101 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 OTOL1A6NHN0 477 aaPredicted RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SLITRK5O94991 958 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CD3GP09693 182 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 TSFMP43897 325 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 RAB15P59190 212 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 DUSP5Q16690 384 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SWI5Q1ZZU3 235 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 GXYLT1Q4G148 440 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 B3GLCTQ6Y288 498 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 FUNDC1Q8IVP5 155 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 FAM217AQ8IXS0 508 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 TRMT10AQ8TBZ6 339 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 METTL8Q9H825 291 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 MYEF2Q9P2K5 600 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 MRPS2Q9Y399 296 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 H7C1C5 153 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SUSD5O60279 629 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 IGHG1P01857 330 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 RLN2P04090 185 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CSF2P04141 144 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 AQP2P41181 271 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SLC6A12P48065 614 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 LCN6P62502 163 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 TUBA4AP68366 448 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 EXT1Q16394 746 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 VASNQ6EMK4 673 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 OR7E24Q6IFN5 339 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 ELP5Q8TE02 316 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CNOT9Q92600 299 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 NEURL3Q96EH8 262 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 LRRC3BQ96PB8 259 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 LMF1Q96S06 567 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 INTS14Q96SY0 518 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SGPP1Q9BX95 441 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 HCAR1Q9BXC0 346 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 GORASP2Q9H8Y8 452 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 TESQ9UGI8 421 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 SH2B3Q9UQQ2 575 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 MKRN2OSH3BPM6 223 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CBFA2T3O75081 653 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 POLR2IP36954 125 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 PSMB10P40306 273 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CXCR4P61073 352 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 DEFB109BQ30KR1 87 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 FAM205BPQ63HN1 556 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SLC35F3Q8IY50 421 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 LSM14AQ8ND56 463 aaKnown RBP8.58□□□□□ -1.04
GGA3-223ENST00000621870 SLC2A12Q8TD20 617 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 ABHD5Q8WTS1 349 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 C15orf40Q8WUR7 153 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 LGALS12Q96DT0 336 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 CCDC120Q96HB5 630 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 ZNF337Q9Y3M9 751 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 SPEF1Q9Y4P9 236 aa8.58□□□□□ -1.04
GGA3-223ENST00000621870 C7P10643 843 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TRHRP34981 398 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 RFC3P40938 356 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 AP2S1P53680 142 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 CLDN17P56750 224 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 YBX1P67809 324 aaKnown RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 TUBA1BP68363 451 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TUBA1AQ71U36 451 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZNF367Q7RTV3 350 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ABHD12BQ7Z5M8 362 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 YRDCQ86U90 279 aaKnown RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 OR6T1Q8NGN1 323 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ALG8Q9BVK2 526 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 DDX31Q9H8H2 851 aaKnown RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 LYRM4Q9HD34 91 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 LUZP4Q9P127 313 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ABCA1O95477 2261 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ABCA4P78363 2273 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 PCNTO95613 3336 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TMED7-TICAM2A0A0A6YYA0 188 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 PRAMEF25A6NGN4 478 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 IFNA21P01568 189 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 IGHV3-9P01782 118 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 NPR2P20594 1047 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 BCKDHBP21953 392 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 FZD2Q14332 565 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 GLYR1Q49A26 553 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZFP69Q49AA0 526 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 NIPAL3Q6P499 406 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 Q6ZPB1 254 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 AKAP14Q86UN6 197 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 DNAAF1Q8NEP3 725 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 NRG4Q8WWG1 115 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ISL2Q96A47 359 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TNFRSF13CQ96RJ3 184 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 DYNLRB1Q9NP97 96 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 LRFN1Q9P244 771 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 DNAJB11Q9UBS4 358 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms