RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C5orf51A6NDU8 294 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SGK494L7N484 410 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 MAN2B1O00754 1011 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CLDN4O14493 209 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CDC42EP2O14613 210 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 B3GALT2O43825 422 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 UCHL1P09936 223 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GKN3PP0CG01 181 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 BMP8BP34820 402 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SWI5Q1ZZU3 235 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 FAM78AQ5JUQ0 283 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 NDUFAF5Q5TEU4 345 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GPR139Q6DWJ6 353 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 VASNQ6EMK4 673 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM81Q6P7N7 255 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 C17orf107Q6ZR85 190 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 Q6ZTK2 550 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 PRSS42Q7Z5A4 293 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 BMP8AQ7Z5Y6 402 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 LRRC28Q86X40 367 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SLITRK4Q8IW52 837 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 OR4N5Q8IXE1 308 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 OR5W2Q8NH69 310 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ST8SIA4Q92187 359 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CXorf58Q96LI9 332 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SORCS2Q96PQ0 1159 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 LYSMD1Q96S90 227 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 PCBD2Q9H0N5 130 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CYSLTR2Q9NS75 346 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SIRT3Q9NTG7 399 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-216ENST00000620854 BABAM2Q9NXR7 383 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TAS2R10Q9NYW0 307 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TEX51A0A1B0GUA7 166 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 OR14I1A6ND48 311 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 FMO6PO60774 539 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SLC19A2O60779 497 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CDC123O75794 336 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TFP02787 698 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF3P17036 446 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 C21orf58P58505 322 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 MELKQ14680 651 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 PON3Q15166 354 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TCTE1Q5JU00 501 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ARL14Q8N4G2 192 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GATSQ8NAP1 163 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 THEM6Q8WUY1 208 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 THAP4Q8WY91 577 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 DPH7Q9BTV6 452 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 VN1R3Q9BXE9 311 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SEMA4CQ9C0C4 833 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 COMMD4Q9H0A8 199 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 NT5DC2Q9H857 520 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 MKKSQ9NPJ1 570 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-216ENST00000620854 DLL4Q9NR61 685 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 KLHL42Q9P2K6 505 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 KLK11Q9UBX7 282 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 RCE1Q9Y256 329 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ARRDC5A6NEK1 342 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 ARPC5O15511 151 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 LCMT2O60294 686 aaKnown RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 GREM1O60565 184 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 RGS9O75916 674 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 HLA-DQB1P01920 261 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 ADRB1P08588 477 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 HOXB3P14651 431 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 TIMP2P16035 220 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 GRPRP30550 384 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 SIM1P81133 766 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 ELOAQ14241 798 aaKnown RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 CST6Q15828 149 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 CCNJQ5T5M9 372 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 METAP1DQ6UB28 335 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 DGLUCYQ7Z3D6 616 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 STPG2Q8N412 459 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 JAGN1Q8N5M9 183 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 PLA2G15Q8NCC3 412 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 TOR1AIP2Q8NFQ8 470 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 VN1R2Q8NFZ6 395 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 OR6M1Q8NGM8 313 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 OR2T4Q8NH00 348 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 OR8S1Q8NH09 359 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 SCMH1Q96GD3 660 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 C4orf36Q96KX1 117 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 ADAD1Q96M93 576 aaKnown RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 PBX4Q9BYU1 374 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 ERVMER34-1Q9H9K5 563 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 FGF20Q9NP95 211 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 MED11Q9P086 117 aa6.46□□□□□ -1.37
NEDD9-216ENST00000620854 PCYT1BQ9Y5K3 369 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-216ENST00000620854 NPIPA5A0A0B4J1W7 369 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 RPS10-NUDT3A0A1W2PQS6 291 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ANTXRLA6NF34 631 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 TRABD2BA6NFA1 517 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 NPIPA7E9PJI5 369 aa6.46□□□□□ -1.38
NEDD9-216ENST00000620854 FOXE1O00358 373 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 KHNYNO15037 678 aaKnown RBP6.46□□□□□ -1.38
NEDD9-216ENST00000620854 ARPC1BO15143 372 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms