RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PLEKHA1Q9HB21 404 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SERPINA7P05543 415 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MAPK3P27361 379 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CCR7P32248 378 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 UGT3A2Q3SY77 523 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 RDH10Q8IZV5 341 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 DYRK2Q92630 601 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 OPA3Q9H6K4 179 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 AKIRIN1Q9H9L7 192 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PCDHGA5Q9Y5G8 931 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 WNT1P04628 370 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PTGFRP43088 359 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 STC1P52823 247 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 IL13RA1P78552 427 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TEAD2Q15562 447 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CLLU1Q5K131 121 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CPZQ66K79 652 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 RTN4RL1Q86UN2 441 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM173Q86WV6 379 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 RBM45Q8IUH3 476 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ETFBKMTQ8IXQ9 262 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 KIAA1958Q8N8K9 716 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF610Q8N9Z0 462 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 IL17FQ96PD4 163 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NOX4Q9NPH5 578 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 GAR1Q9NY12 217 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NTMQ9P121 344 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MRPS33Q9Y291 106 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 DERAQ9Y315 318 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SLC22A7Q9Y694 548 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PPRC1Q5VV67 1664 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 FAM230AA0A1W2PPH8 454 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 C2orf78A6NCI8 922 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ATG13O75143 517 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 COL19A1Q14993 1142 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PPA1Q15181 289 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MPEG1Q2M385 716 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 C16orf78Q8WTQ4 265 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 IL22RA2Q969J5 263 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 H7BY64 318 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 BET1O15155 118 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NTN1O95631 604 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 LGI1O95970 557 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MDKP21741 143 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 DCTDP32321 178 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SLC6A11P48066 632 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CCR9P51686 369 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CLDN2P57739 230 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM104Q8NE00 496 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 OR6N2Q8NGY6 317 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 DPF3Q92784 378 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 RERGQ96A58 199 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PRAP1Q96NZ9 151 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TXN2Q99757 166 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SPATC1LQ9H0A9 340 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 LANCL1O43813 399 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PCMT1P22061 227 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NRG3P56975 720 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 LILRA4P59901 499 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NNATQ16517 81 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PELI3Q8N2H9 469 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SGK3Q96BR1 496 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TSPAN10Q9H1Z9 355 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NME7Q9Y5B8 376 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TRAPPC13A5PLN9 417 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF860A6NHJ4 632 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TAS2R43P59537 309 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SOX4Q06945 474 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 GUCA2BQ16661 112 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TRIM46Q7Z4K8 759 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 PXKQ7Z7A4 578 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ADIPOR2Q86V24 386 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ZFP62Q8NB50 900 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 EXTL1Q92935 676 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 ISL2Q96A47 359 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SMG9Q9H0W8 520 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 EVA1AQ9H8M9 152 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 QTRT2Q9H974 415 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 POLMQ9NP87 494 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 CTSFQ9UBX1 484 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 A0A0D9SG52 128 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MROH6A6NGR9 719 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 NDUFV2P19404 249 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 GABRA3P34903 492 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 HSD17B2P37059 387 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 KRTDAPP60985 99 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 BTG1P62324 171 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TBCEQ15813 527 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TRNP1Q6NT89 227 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM19Q96HH6 336 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 F2RL3Q96RI0 385 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 SLC6A13Q9NSD5 602 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 MYH1P12882 1939 aa4.72□□□□□ -1.65
VPS13D-214ENST00000620676 RAD51DO75771 328 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 ELFN1P0C7U0 828 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 OAZ1P54368 228 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms