RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 C1GALT1C1LP0DN25 315 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 XPAP23025 273 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 HAAOP46952 286 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 OMPP47874 163 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SLC3A1Q07837 685 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 IL10RAQ13651 578 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SERPINA13PQ6UXR4 307 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF704Q6ZNC4 412 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 CPOQ8IVL8 374 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 BBS1Q8NFJ9 593 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SUN3Q8TAQ9 357 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 HLA-CQ95604 372 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 TMEM159Q96B96 161 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 FAM46AQ96IP4 442 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 GINS4Q9BRT9 223 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 PINK1Q9BXM7 581 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 CACYBPQ9HB71 228 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 TRAPPC13A5PLN9 417 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SOCS6O14544 535 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 RLN2P04090 185 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 S100A8P05109 93 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 CNR1P21554 472 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 MPGP29372 298 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 GDI2P50395 445 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SYPL1Q16563 259 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF311Q5JNZ3 666 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF620Q6ZNG0 422 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 MEPCEQ7L2J0 689 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 PRSS45Q7RTY3 260 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ARMC10Q8N2F6 343 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SLC35G5Q96KT7 338 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 DMRTA2Q96SC8 542 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 MFFQ9GZY8 342 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF768Q9H5H4 540 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 UBE2ZQ9H832 354 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 KRCC1Q9NPI7 259 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 HINT3Q9NQE9 182 aaKnown RBP10.04□□□□□ -0.8
UPF3A-212ENST00000619079 SLC13A4Q9UKG4 626 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 OR51B4Q9Y5P0 310 aa10.04□□□□□ -0.8
UPF3A-212ENST00000619079 ANKRD20A5PA0PJZ0 165 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SLC38A8A6NNN8 435 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 K7ERQ8 282 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SYT5O00445 386 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 RAD1O60671 282 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 S100A9P06702 114 aaKnown RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 FABP1P07148 127 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 HNRNPA1P09651 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 NDUFV2P19404 249 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 AGTR1P30556 359 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 FAUP35544 74 aaKnown RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 BUD31P41223 144 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 STARP49675 285 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 KHKP50053 298 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 HSPB3Q12988 150 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 NIPAL3Q6P499 406 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 TMEM184AQ6ZMB5 413 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 MOB3CQ70IA8 216 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OVCH1Q7RTY7 1134 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 COMTD1Q86VU5 262 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 DNAAF1Q8NEP3 725 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OR10H4Q8NGA5 316 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OR6S1Q8NH40 331 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SLC22A8Q8TCC7 542 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SFT2D1Q8WV19 159 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 XAGE5Q8WWM1 108 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OVCA2Q8WZ82 227 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 TCEAL3Q969E4 200 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 PHYHIPLQ96FC7 376 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF764Q96H86 408 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ARL5BQ96KC2 179 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ZNF251Q9BRH9 671 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 MBD1Q9UIS9 605 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 CKAP5Q14008 2032 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 A0A0D9SG52 128 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SULT1C2O00338 296 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 TBL1XO60907 577 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ANXA7P20073 488 aaKnown RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SDHBP21912 280 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 GPR143P51810 404 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 NR0B1P51843 470 aaKnown RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ART1P52961 327 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 TBPL1P62380 186 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 SIM1P81133 766 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 DECR1Q16698 335 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 UAP1L1Q3KQV9 507 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ARSIQ5FYB1 569 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 DMKNQ6E0U4 476 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 NHLRC1Q6VVB1 395 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 RTL10Q7L3V2 364 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 GRASPQ7Z6J2 395 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OR4D9Q8NGE8 314 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 OR52I2Q8NH67 350 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 LGALS14Q8TCE9 139 aa10.03□□□□□ -0.8
UPF3A-212ENST00000619079 ACOT11Q8WXI4 607 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms