RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CPA2P48052 419 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 PCYT1AP49585 367 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 MYBPHQ13203 477 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 ZSWIM7Q19AV6 140 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 PPP4R4Q6NUP7 873 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 GRINAQ7Z429 371 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 SLC25A43Q8WUT9 341 aaPredicted RBP22.28■■□□□ 1.16
PMS1-220ENST00000618056 GALNT8Q9NY28 637 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 NDUFAF1Q9Y375 327 aa22.28■■□□□ 1.16
PMS1-220ENST00000618056 SS18L1O75177 396 aaPredicted RBP22.27■■□□□ 1.16
PMS1-220ENST00000618056 CGAP01215 116 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 PABPC4LP0CB38 370 aaKnown RBP22.27■■□□□ 1.16
PMS1-220ENST00000618056 CD8BP10966 210 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 SLC7A1P30825 629 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 ARFIP2P53365 341 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 SIRPAP78324 504 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 RPS26P11Q5JNZ5 115 aaPredicted RBP22.27■■□□□ 1.16
PMS1-220ENST00000618056 RNF220Q5VTB9 566 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 ZNF440Q8IYI8 595 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 ATP6V1C2Q8NEY4 427 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 MAL2Q969L2 176 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 SRXN1Q9BYN0 137 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 IKZF5Q9H5V7 419 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 EMC9Q9Y3B6 208 aa22.27■■□□□ 1.16
PMS1-220ENST00000618056 CCDC168Q8NDH2 2452 aa22.27■■□□□ 1.15
PMS1-220ENST00000618056 HRNRQ86YZ3 2850 aaPredicted RBP22.26■■□□□ 1.15
PMS1-220ENST00000618056 EVPLLA8MZ36 301 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 ANGPT2O15123 496 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 ARAFP10398 606 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 RAC3P60763 192 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 SNTB1Q13884 538 aaKnown RBP22.26■■□□□ 1.15
PMS1-220ENST00000618056 LARS2Q15031 903 aaKnown RBP22.26■■□□□ 1.15
PMS1-220ENST00000618056 GLIPR1L2Q4G1C9 344 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 GTF2IRD2BQ6EKJ0 949 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 ZNF836Q6ZNA1 936 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 GTF2IRD2Q86UP8 949 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 VRK2Q86Y07 508 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 C10orf111Q8N326 155 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 BBS10Q8TAM1 723 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 RNF128Q8TEB7 428 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 FAM222BQ8WU58 562 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 LURAP1Q96LR2 239 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 CRIM1Q9NZV1 1036 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 ZNF232Q9UNY5 417 aa22.26■■□□□ 1.15
PMS1-220ENST00000618056 ZNF443Q9Y2A4 671 aaPredicted RBP22.26■■□□□ 1.15
PMS1-220ENST00000618056 SPIN1Q9Y657 262 aaPredicted RBP22.26■■□□□ 1.15
PMS1-220ENST00000618056 CFAP73A6NFT4 308 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 AP3D1O14617 1153 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 SMNDC1O75940 238 aaKnown RBP eCLIP22.25■■□□□ 1.15
PMS1-220ENST00000618056 PLGP00747 810 aaPredicted RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 UQCRBP14927 111 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 FKBP2P26885 142 aaKnown RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 HTR3AP46098 478 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 IDH2P48735 452 aaKnown RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 EPS8Q12929 822 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 SYT14P1Q58G82 188 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 RUNDC3AQ59EK9 446 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 GCNT6Q5T4J0 391 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 DHDDSQ86SQ9 333 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 RETREG3Q86VR2 466 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 OR6K3Q8NGY3 331 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 REXO5Q96IC2 774 aaKnown RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 CPPED1Q9BRF8 314 aaPredicted RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 CTPS2Q9NRF8 586 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 RLIMQ9NVW2 624 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.25■■□□□ 1.15
PMS1-220ENST00000618056 CHRNA9Q9UGM1 479 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 IFT52Q9Y366 437 aa22.25■■□□□ 1.15
PMS1-220ENST00000618056 TUBAL3A6NHL2 446 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 PGM3O95394 542 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 ETS2P15036 469 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 RNPS1Q15287 305 aaKnown RBP22.24■■□□□ 1.15
PMS1-220ENST00000618056 TMEM38AQ9H6F2 299 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 ARMC7Q9H6L4 198 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 CACYBPQ9HB71 228 aaKnown RBP22.24■■□□□ 1.15
PMS1-220ENST00000618056 GP6Q9HCN6 339 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 PROCRQ9UNN8 238 aa22.24■■□□□ 1.15
PMS1-220ENST00000618056 A0A1W2PNR3 127 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 C5orf58C9J3I9 102 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 SLC1A3P43003 542 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 CTBP2P56545 445 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ZNF474Q6S9Z5 364 aaPredicted RBP22.23■■□□□ 1.15
PMS1-220ENST00000618056 FCRLAQ7L513 359 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ADGRG3Q86Y34 549 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ZZZ3Q8IYH5 903 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ROBO4Q8WZ75 1007 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ANKRD27Q96NW4 1050 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ZNF317Q96PQ6 595 aaPredicted RBP22.23■■□□□ 1.15
PMS1-220ENST00000618056 OR5B2Q96R09 309 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 SPATA9Q9BWV2 254 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 OPN3Q9H1Y3 402 aaPredicted RBP22.23■■□□□ 1.15
PMS1-220ENST00000618056 PLSCR4Q9NRQ2 329 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 KLHL14Q9P2G3 628 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 CLEC4AQ9UMR7 237 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 CHST2Q9Y4C5 530 aa22.23■■□□□ 1.15
PMS1-220ENST00000618056 ACAA2P42765 397 aaKnown RBP22.22■■□□□ 1.15
PMS1-220ENST00000618056 CLK1P49759 484 aaKnown RBP22.22■■□□□ 1.15
PMS1-220ENST00000618056 MAP2K6P52564 334 aa22.22■■□□□ 1.15
PMS1-220ENST00000618056 KRTAP10-9P60411 292 aa22.22■■□□□ 1.15
PMS1-220ENST00000618056 DMTNQ08495 405 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms