RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 FLNBO75369 2602 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 SETXQ7Z333 2677 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 SH3D21A4FU49 640 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 UNC119BA6NIH7 251 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 C9orf172C9J069 976 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 HCN1O60741 890 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 HMGN1P05114 100 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 COX6A1P12074 109 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 HTR2AP28223 471 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 TTKP33981 857 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 DLSTP36957 453 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 CTBP2P56545 445 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 SKP2Q13309 424 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 FAM69BQ5VUD6 431 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 C5orf46Q6UWT4 87 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 PRICKLE2Q7Z3G6 844 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 SVOPQ8N4V2 548 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 GATSQ8NAP1 163 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 ZSCAN1Q8NBB4 408 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 POGLUT1Q8NBL1 392 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 OR5W2Q8NH69 310 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 B4GALNT2Q8NHY0 566 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 THAP3Q8WTV1 239 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 TMEM255BQ8WV15 326 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 PMEPA1Q969W9 287 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 BPIFA2Q96DR5 249 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 FAM46AQ96IP4 442 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 IMMP1LQ96LU5 166 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 SECISBP2Q96T21 854 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 PRR14Q9BWN1 585 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 METTL7AQ9H8H3 244 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 AKIRIN1Q9H9L7 192 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 TBC1D23Q9NUY8 699 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 KLRF1Q9NZS2 232 aa15.35■□□□□ 0.05
TRAPPC3-210ENST00000617904 ASH1LQ9NR48 2969 aaKnown RBP15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 EFCAB9A8MZ26 197 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 PYCARD-AS1I3L0S3 204 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 CDC40O60508 579 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 FAM20BO75063 409 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SLC25A12O75746 678 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 IGF2P01344 180 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SAGP10523 405 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 ATP6V1B1P15313 513 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 CXCR1P25024 350 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 POLR2IP36954 125 aaKnown RBP15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SLC1A3P43003 542 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 OMPP47874 163 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SSR4P51571 173 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 MEP1AQ16819 746 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 FNDC7Q5VTL7 733 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SLX4IPQ5VYV7 408 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 TMPRSS11FQ6ZWK6 438 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 DTX1Q86Y01 620 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 BPIFB6Q8NFQ5 453 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 OR11G2Q8NGC1 345 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 OR8J1Q8NGP2 316 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 ASB15Q8WXK1 588 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 MYDGFQ969H8 173 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 LMF1Q96S06 567 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 SLC25A19Q9HC21 320 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 ZNF160Q9HCG1 818 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 ABI3Q9P2A4 366 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 REV1Q9UBZ9 1251 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 TEKT2Q9UIF3 430 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 ZNF223Q9UK11 482 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 BAIAP2Q9UQB8 552 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 CDH10Q9Y6N8 788 aa15.34■□□□□ 0.05
TRAPPC3-210ENST00000617904 A0A087WUJ7 227 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 IRGMA1A4Y4 181 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SCO2O43819 266 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 FADS1O60427 444 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 WT1P19544 449 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 CRHBPP24387 322 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SLC9A3P48764 834 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 RNF144AP50876 292 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SNTA1Q13424 505 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 ANKDD1AQ495B1 522 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 JMJD6Q6NYC1 403 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF773Q6PK81 442 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 KIRREL2Q6UWL6 708 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 MARCH3Q86UD3 253 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 VASH2Q86V25 355 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 TMEM156Q8N614 296 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 IL22RA1Q8N6P7 574 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 FBLIM1Q8WUP2 373 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 EXTL1Q92935 676 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SGTBQ96EQ0 304 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 PRSS27Q9BQR3 290 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 TMEM43Q9BTV4 400 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SPRY4Q9C004 299 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 RASSF1Q9NS23 344 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 MED17Q9NVC6 651 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 NTNG1Q9Y2I2 539 aa15.33■□□□□ 0.04
TRAPPC3-210ENST00000617904 SMIM31A0A1B0GVY4 71 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 SLC1A7O00341 560 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 OR2J2O76002 312 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 SOX14O95416 240 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 FBXO45P0C2W1 286 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms