RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.13□□□□□ -1.27
NEK3-207ENST00000617054 C1QL3Q5VWW1 255 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 PLBD1Q6P4A8 553 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 BMP8AQ7Z5Y6 402 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 LHFPL3Q86UP9 236 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 CPOQ8IVL8 374 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 C10orf53Q8N6V4 93 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 AGBL5Q8NDL9 886 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 PLPP5Q8NEB5 264 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ANKK1Q8NFD2 765 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 OR14A16Q8NHC5 309 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 IPCEF1Q8WWN9 437 aaPredicted RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 TBX5Q99593 518 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 WDR77Q9BQA1 342 aaPredicted RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 PELOQ9BRX2 385 aaKnown RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 POLE3Q9NRF9 147 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 PLCXD1Q9NUJ7 323 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 FKBP14Q9NWM8 211 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 PTTG2Q9NZH5 202 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ADAM18Q9Y3Q7 739 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 PTPRZ1P23471 2315 aaPredicted RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 CACNA1CQ13936 2221 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 LOC100506127A0A0U1RQW1 187 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TMEM200CA6NKL6 621 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 EFCAB9A8MZ26 197 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 BLOC1S5-TXNDC5H3BN57 136 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SURF4O15260 269 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 YKT6O15498 198 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ZNF264O43296 627 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 PPP1R3DO95685 299 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 NOS3P29474 1203 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 STAT5AP42229 794 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SNRPGP62308 76 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 PRKCDQ05655 676 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SKP2Q13309 424 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 KLHL12Q53G59 568 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR2G6Q5TZ20 316 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 PLAG1Q6DJT9 500 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ULK3Q6PHR2 472 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 C3orf49Q96BT1 292 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 PLEKHA8Q96JA3 519 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 HS6ST2Q96MM7 605 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TUBA1CQ9BQE3 449 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TTTY10Q9BZA0 68 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SLC39A1Q9NY26 324 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SEC14L4Q9UDX3 406 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SIGLEC7Q9Y286 467 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 PCDHGB1Q9Y5G3 927 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 EML6Q6ZMW3 1958 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OPN1LWP04000 364 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 BMP7P18075 431 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ACVR2AP27037 513 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 GALNSP34059 522 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 HOXD12P35452 270 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ETV1P50549 477 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 DUSP3P51452 185 aaPredicted RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 NFATC3Q12968 1075 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ARMCX4Q5H9R4 360 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SYT6Q5T7P8 510 aaPredicted RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 ZNF613Q6PF04 617 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 GRAMD2AQ8IUY3 354 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 CDK20Q8IZL9 346 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 LINC00471Q8N535 108 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 LSMEM1Q8N8F7 131 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 NFAM1Q8NET5 270 aaPredicted RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR2T33Q8NG76 320 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TMEM163Q8TC26 289 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 RNFT2Q96EX2 444 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 MOGAT1Q96PD6 335 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 POLDIP3Q9BY77 421 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 TBL1XR1Q9BZK7 514 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR51E2Q9H255 320 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ANKRD19PQ9H560 264 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 HINT3Q9NQE9 182 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 PTRH2Q9Y3E5 179 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 HRH3Q9Y5N1 445 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 IGLV3-12A0A075B6K2 115 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TSPAN2O60636 221 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR2J2O76002 312 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 MRPL3P09001 348 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 GADD45AP24522 165 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TGFBR2P37173 567 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 SLC15A1P46059 708 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 FHL1Q13642 323 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 PGGHGQ32M88 737 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 FNDC7Q5VTL7 733 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ZNF550Q7Z398 422 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 CPEB2Q7Z5Q1 589 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ERI1Q8IV48 349 aaKnown RBP7.12□□□□□ -1.27
NEK3-207ENST00000617054 GALNT15Q8N3T1 639 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ZFP41Q8N8Y5 198 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 ZNF527Q8NB42 609 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OR52I1Q8NGK6 324 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 OSTF1Q92882 214 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 FGF11Q92914 225 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms