RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 VPS13CQ709C8 3753 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 TRGV5A0A0B4J1U4 118 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 EIF4E2O60573 245 aaKnown RBP13.44□□□□□ -0.26
UBXN1-218ENST00000616865 UBTFL6P0CB48 400 aaPredicted RBP13.44□□□□□ -0.26
UBXN1-218ENST00000616865 GABRA1P14867 456 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 PTGDSP41222 190 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 SNTB1Q13884 538 aaKnown RBP13.44□□□□□ -0.26
UBXN1-218ENST00000616865 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 TOMM20Q15388 145 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 CD226Q15762 336 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 OR5M10Q6IEU7 315 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 DHRS4L2Q6PKH6 230 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 CYP2R1Q6VVX0 501 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF836Q6ZNA1 936 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF440Q8IYI8 595 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 B4GALNT2Q8NHY0 566 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 TAMM41Q96BW9 452 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 TMEM41AQ96HV5 264 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 PTGES2Q9H7Z7 377 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 GORASP2Q9H8Y8 452 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 ZFP64Q9NPA5 681 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 SAMD4AQ9UPU9 718 aaKnown RBP13.44□□□□□ -0.26
UBXN1-218ENST00000616865 DNHD1Q96M86 4753 aa13.44□□□□□ -0.26
UBXN1-218ENST00000616865 CLDN24A6NM45 220 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 SNPHO15079 494 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 GCM2O75603 506 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-218ENST00000616865 UQCRBP14927 111 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 PEX19P40855 299 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 KIR2DL3P43628 341 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 KCNJ5P48544 419 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 GAS1P54826 345 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 EEF1A1P68104 462 aaKnown RBP13.43□□□□□ -0.26
UBXN1-218ENST00000616865 DMTNQ08495 405 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 FOXD4Q12950 439 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-218ENST00000616865 FLOT2Q14254 428 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 NDUFAF6Q330K2 333 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 TIGD3Q6B0B8 471 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF550Q7Z398 422 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 TOR1AIP2Q8NFQ8 470 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 RNF138Q8WVD3 245 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 CNOT9Q92600 299 aaKnown RBP13.43□□□□□ -0.26
UBXN1-218ENST00000616865 LAT2Q9GZY6 243 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 DSN1Q9H410 356 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 EXO5Q9H790 373 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 EVA1AQ9H8M9 152 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 ALKBH4Q9NXW9 302 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 CRIM1Q9NZV1 1036 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 MED11Q9P086 117 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 SLC9A8Q9Y2E8 581 aa13.43□□□□□ -0.26
UBXN1-218ENST00000616865 HRNRQ86YZ3 2850 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-218ENST00000616865 CDHR4A6H8M9 788 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 CBR3O75828 277 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 GDF1P27539 372 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 UQCRC1P31930 480 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 SLC6A8P48029 635 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 P2RX1P51575 399 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 SELENOWP63302 87 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF117Q03924 483 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 CBFBQ13951 182 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 FNDC7Q5VTL7 733 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 LCN8Q6JVE9 175 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 CBLL1Q75N03 491 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 SPATA24Q86W54 205 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 CLIP4Q8N3C7 705 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 RELL2Q8NC24 303 aaPredicted RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 GNRHR2Q96P88 292 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 ALPK1Q96QP1 1244 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 RTN4RQ9BZR6 473 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 PROK2Q9HC23 129 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 DLL4Q9NR61 685 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
UBXN1-218ENST00000616865 SLC7A8Q9UHI5 535 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 POMPQ9Y244 141 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 PLEKHA6Q9Y2H5 1048 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 V9GYQ6 96 aa13.42□□□□□ -0.26
UBXN1-218ENST00000616865 CFAP73A6NFT4 308 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 LRRC3CA6NJW4 275 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 A6NNC1 897 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 HSPB2A8KAH6 182 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 SYT5O00445 386 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 TPST1O60507 370 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 FESP07332 822 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 C8BP07358 591 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 LINGO3P0C6S8 592 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms