RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ARHGAP9Q9BRR9 750 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 CYP8B1Q9UNU6 501 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 SEMA7AO75326 666 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ATXN1LP0C7T5 689 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ACP5P13686 325 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF44P15621 663 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 MMP11P24347 488 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ITPKBP27987 946 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 NCBP2P52298 156 aaKnown RBP eCLIP12.66□□□□□ -0.384e-10■■□□□ 14.2
PPP4R3B-205ENST00000616288 MAPK14Q16539 360 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 OLIG3Q7RTU3 272 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 FAM26EQ8N5C1 309 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 KCNRGQ8N5I3 272 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 MDGA1Q8NFP4 955 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 HEXA-AS1Q9H8Q6 139 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 TMEM235A6NFC5 223 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 A6NLC8 198 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 HEPACAM2A8MVW5 462 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 PYCARD-AS1I3L0S3 204 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 AP4M1O00189 453 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 GMFGO60234 142 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 RAD1O60671 282 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 QDPRP09417 244 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 PTGER1P34995 402 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZFP36L2P47974 494 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ACER2Q5QJU3 275 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ADGRF1Q5T601 910 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF322Q6U7Q0 402 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 SBSNQ6UWP8 590 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 GRHL3Q8TE85 626 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 PHB2Q99623 299 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 DCTN6O00399 190 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 IGSF6O95976 241 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 STATHP02808 62 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 NPBWR1P48145 328 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 GLDNQ6ZMI3 551 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF584Q8IVC4 421 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 RIOK2Q9BVS4 552 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 MAGEH1Q9H213 219 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 SPACA1Q9HBV2 294 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 TAS2R5Q9NYW4 299 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 CARNS1A5YM72 827 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 A8MXK9 166 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 RTCAO00442 366 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 C1QCP02747 245 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 EDN3P14138 238 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 ATP5C1P36542 298 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 MRPL19P49406 292 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 CAP1Q01518 475 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 EBPQ15125 230 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 RNASE10Q5GAN6 216 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 LRRTM3Q86VH5 581 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 COMTD1Q86VU5 262 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF280BQ86YH2 543 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 GLB1L2Q8IW92 636 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 PLA2G15Q8NCC3 412 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR2L3Q8NG85 312 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 HPSE2Q8WWQ2 592 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZMYND19Q96E35 227 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 MMP24Q9Y5R2 645 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZC3H12DA2A288 527 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR10H2O60403 315 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 PRAMEF11O60813 436 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 AQP8O94778 261 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 YIF1AO95070 293 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 FABP4P15090 132 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 VAMP2P63027 116 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 RPP30P78346 268 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 UBE2NLQ5JXB2 153 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 LRRC56Q8IYG6 542 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 RAB42Q8N4Z0 105 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR1S1Q8NH92 325 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 PPP1R16AQ96I34 528 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 C11orf84Q9BUA3 381 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 TAPBPLQ9BX59 468 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 SUV39H2Q9H5I1 410 aa12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
PPP4R3B-205ENST00000616288 CBY3A6NI87 242 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms