RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CCNB2O95067 398 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 APOC3P02656 99 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 POU2F1P14859 743 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 SSTR4P31391 388 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 EEF1A2Q05639 463 aaKnown RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 PDE7AQ13946 482 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 OPCMLQ14982 345 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 PYHIN1Q6K0P9 492 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 B3GNT7Q8NFL0 401 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 OR2L3Q8NG85 312 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 OR5AK3PQ8NH89 298 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 MRPL48Q96GC5 212 aaKnown RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 EFCAB11Q9BUY7 163 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 OR51J1Q9H342 316 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DMRT3Q9NQL9 472 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ACER3Q9NUN7 267 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 SLC6A5Q9Y345 797 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ASXL3Q9C0F0 2248 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 MUC6Q6W4X9 2439 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 A0A1B0GW55 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 C2orf74A8MZ97 194 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 M0R129 80 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 GADD45GO95257 159 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 NMBP08949 121 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 PIPP12273 146 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 GLB1P16278 677 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 CMPK1P30085 196 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 LCN1P31025 176 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 SOAT1P35610 550 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 XCR1P46094 333 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 CCR8P51685 355 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 CDC42P60953 191 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 HFEQ30201 348 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF57Q68EA5 555 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 PLAG1Q6DJT9 500 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 FAM198BQ6UWH4 519 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ZER1Q7Z7L7 766 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 LAS2Q8IYD9 372 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF565Q8N9K5 539 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF285Q96NJ3 590 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 MAPKAP1Q9BPZ7 522 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-219ENST00000615335 MYNNQ9NPC7 610 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 ENTPD2Q9Y5L3 495 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 LILRA5A6NI73 299 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 UGT2B7P16662 529 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 TAS2R50P59544 299 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 SLC5A12Q1EHB4 618 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 FAM71E1Q6IPT2 247 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 ATRAIDQ6UW56 229 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 TMEM163Q8TC26 289 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 TMEM121BQ9BXQ6 578 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-219ENST00000615335 ENPP4Q9Y6X5 453 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 RP1P56715 2156 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 UNC13CQ8NB66 2214 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 A0A1W2PRB8 838 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 TRBC2A0A5B9 178 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 FAM74A7A6NL05 159 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 LGALS8O00214 317 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 MPZL2O60487 215 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 KLK1P06870 262 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 HBQ1P09105 142 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 ARAFP10398 606 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 CALCRP30988 508 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 LIMS1P48059 325 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 KCNJ5P48544 419 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 HMGA2P52926 109 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 STX4Q12846 297 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 GANABQ14697 944 aaKnown RBP12.11□□□□□ -0.47
FOXN3-219ENST00000615335 PTGES3Q15185 160 aaKnown RBP12.11□□□□□ -0.47
FOXN3-219ENST00000615335 MICBQ29980 383 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 PLA1AQ53H76 456 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 AQP11Q8NBQ7 271 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF740Q8NDX6 193 aa12.11□□□□□ -0.47
FOXN3-219ENST00000615335 AIF1LQ9BQI0 150 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms