RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CXCL2P19875 107 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 NFYAP23511 347 aaPredicted RBP20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 TAS2R50P59544 299 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 TSPAN31Q12999 210 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 PIN1Q13526 163 aaPredicted RBP20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 ADNP2Q6IQ32 1131 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 SLC9B2Q86UD5 537 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 KLBQ86Z14 1044 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 ELMOD3Q96FG2 381 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 CXorf58Q96LI9 332 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 PLA2G12AQ9BZM1 189 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 PRM3Q9NNZ6 103 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 DMRT3Q9NQL9 472 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 HPF1Q9NWY4 346 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 DUX4Q9UBX2 424 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 CAMK2AQ9UQM7 478 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 KCNK7Q9Y2U2 307 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 SPAG17Q6Q759 2223 aa20.32■□□□□ 0.84
POLR2J3-220ENST00000613744 SH3BGRLO75368 114 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 CSNK1EP49674 416 aaKnown RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 CCR6P51684 374 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 INSL4Q14641 139 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 TCEA2Q15560 299 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ZNF791Q3KP31 576 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ELFN2Q5R3F8 820 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 MCATQ8IVS2 390 aaKnown RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ZNF527Q8NB42 609 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 OR4F15Q8NGB8 312 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ATOH1Q92858 354 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 RGMAQ96B86 450 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 COX14Q96I36 57 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 GPA33Q99795 319 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 EFCAB11Q9BUY7 163 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 NEUROD4Q9HD90 331 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 PHPT1Q9NRX4 125 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ABRACLQ9P1F3 81 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 PCYT1BQ9Y5K3 369 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 HS3ST3A1Q9Y663 406 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 MCRIP1C9JLW8 97 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 DNASE2O00115 360 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 GMDSO60547 372 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 SELENOFO60613 162 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 HPXP02790 462 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ALDOBP05062 364 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 LPLP06858 475 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 THEGLP0DJG4 465 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 SAGP10523 405 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 ACP5P13686 325 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 SLC30A6Q6NXT4 461 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 OR6V1Q8N148 313 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 SLC22A18ASQ8N1D0 253 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 TEX19Q8NA77 164 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 BEST4Q8NFU0 473 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 C1orf216Q8TAB5 229 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 DNASE2BQ8WZ79 361 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 PIGKQ92643 395 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 MED8Q96G25 268 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 CMTM3Q96MX0 182 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 C1QTNF6Q9BXI9 259 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 BABAM2Q9NXR7 383 aa20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 AKAP7Q9P0M2 348 aaPredicted RBP20.31■□□□□ 0.84
POLR2J3-220ENST00000613744 KNL1Q8NG31 2342 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 A0A0G2JK05 382 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 TRABD2BA6NFA1 517 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 RP2O75695 350 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 KLHL18O94889 574 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CATP04040 527 aaKnown RBP20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CD3GP09693 182 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CD38P28907 300 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CD96P40200 585 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 RAB8AP61006 207 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 ENPP7Q6UWV6 458 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 IL20RBQ6UXL0 311 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 B3GLCTQ6Y288 498 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 SLC6A16Q9GZN6 736 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 MS4A7Q9GZW8 240 aaPredicted RBP20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CDCP1Q9H5V8 836 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 MIEF1Q9NQG6 463 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 GPR52Q9Y2T5 361 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 WDR87Q6ZQQ6 2873 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 ANKRD61A6NGH8 418 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 HMSDA8MTL9 139 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 LILRB5O75023 590 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 TOXO94900 526 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 PPP3CBP16298 524 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 PRSS53Q2L4Q9 553 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 ZNF542PQ5EBM4 170 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 TNFAIP8L2Q6P589 184 aaPredicted RBP20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 RD3Q7Z3Z2 195 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 PRSS33Q8NF86 280 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 KLHDC7BQ96G42 594 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 CAMK1GQ96NX5 476 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 EGLN3Q9H6Z9 239 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 PLEKHA1Q9HB21 404 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 OR6C2Q9NZP2 312 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 TAAR2Q9P1P5 351 aa20.3■□□□□ 0.84
POLR2J3-220ENST00000613744 SLC9B1P1A6NJY1 282 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 J3QRE1 110 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 BCAT2O15382 392 aaPredicted RBP20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 GALR3O60755 368 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms