RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 LPCAT3Q6P1A2 487 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 SERPINA13PQ6UXR4 307 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 GCNT7Q6ZNI0 430 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 Q6ZVL8 140 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 DPPA4Q7L190 304 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 GCNT2Q8N0V5 402 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 C10orf111Q8N326 155 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 BBS10Q8TAM1 723 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 TM9SF4Q92544 642 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 FCGR1BQ92637 280 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 FAM162AQ96A26 154 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 FAM120BQ96EK7 910 aaKnown RBP6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 WDR34Q96EX3 536 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 SHDQ96IW2 340 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 NECTIN4Q96NY8 510 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 MBOAT4Q96T53 435 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 SDHCQ99643 169 aaPredicted RBP6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 GABARAPL1Q9H0R8 117 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 LINC00597Q9H2U6 94 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 EVA1AQ9H8M9 152 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 RNF122Q9H9V4 155 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 C14orf119Q9NWQ9 140 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 VPS29Q9UBQ0 182 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 TMEFF2Q9UIK5 374 aaPredicted RBP6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 C3orf18Q9UK00 162 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 SAMD4AQ9UPU9 718 aaKnown RBP6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 CCL26Q9Y258 94 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 TPRKBQ9Y3C4 175 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 ANAPC1Q9H1A4 1944 aa6.23□□□□□ -1.41
CDKAL1-204ENST00000613575 SPTBN5Q9NRC6 3674 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 BPTFQ12830 3046 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CACNA1GO43497 2377 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TRIOBPQ9H2D6 2365 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 LOC100130705A0A1B0GUX0 176 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 A0A1B0GVC2 190 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PRAMEF27A3QJZ7 478 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 UPK3BL1B0FP48 263 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TMEM238C9JI98 176 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 UPK3BL2E5RIL1 263 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TEX46H3BTG2 121 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CLIC1O00299 241 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 RFXANKO14593 260 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 DVL2O14641 736 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SIGLEC5O15389 551 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 AIREO43918 545 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MT-ND1P03886 318 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 IFNA6P05013 189 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SRPRAP08240 638 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 POU2F2P09086 479 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 METTL15P1P0C7V9 234 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 RD3LP0DJH9 198 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TYRP14679 529 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CD22P20273 847 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CD72P21854 359 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 BDKRB2P30411 391 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 KDELR2P33947 212 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SHMT2P34897 504 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PRLHRP49683 370 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PNLIPRP1P54315 467 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CLDN20P56880 219 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 RPS7P62081 194 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 BTG1P62324 171 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MRPS11P82912 194 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 IRF8Q02556 426 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MLC1Q15049 377 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 ZNF77Q15935 545 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 UGT8Q16880 541 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MPEG1Q2M385 716 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 ZNF674Q2M3X9 581 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 VMACQ2NL98 169 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SOWAHCQ53LP3 525 aaPredicted RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 FAM74A1Q5RGS3 127 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 ATAT1Q5SQI0 421 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 C9orf64Q5T6V5 341 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 ACSM5Q6NUN0 579 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PAMR1Q6UXH9 720 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 C3P1Q6ZMU1 363 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 CBLL1Q75N03 491 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TMEM179BQ7Z7N9 219 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 THOC6Q86W42 341 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PDZD9Q8IXQ8 264 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 GPR137CQ8N3F9 429 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 ZNF283Q8N7M2 679 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SETD9Q8NE22 299 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 OR14A16Q8NHC5 309 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 OIT3Q8WWZ8 545 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 AP3S1Q92572 193 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 HGDQ93099 445 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SCAMP4Q969E2 229 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 SLC38A4Q969I6 547 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 TMEM203Q969S6 136 aa6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MRPL38Q96DV4 380 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 MRPS24Q96EL2 167 aaKnown RBP6.22□□□□□ -1.41
CDKAL1-204ENST00000613575 PEX11GQ96HA9 241 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms