RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 MRI1Q9BV20 369 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SORBS1Q9BX66 1292 aaKnown RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 KCNK12Q9HB15 430 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CUTCQ9NTM9 273 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 POLR2AP24928 1970 aaKnown RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 OR5K3A6NET4 321 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 C17orf105B2RV13 164 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SLC16A6O15403 523 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 NDUFB2O95178 105 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 B4GALNT1Q00973 533 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CD47Q08722 323 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 KMT5CQ86Y97 462 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 OR14K1Q8NGZ2 314 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZFP3Q96NJ6 502 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SLX1AQ9BQ83 275 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ACOT13Q9NPJ3 140 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 LAMP5Q9UJQ1 280 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SGK494L7N484 410 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 RNF13O43567 381 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 HCRTR2O43614 444 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 TOXO94900 526 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 RAF1P04049 648 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 PPP3CBP16298 524 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF20P17024 532 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 MAP3K8P41279 467 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 NUDT6P53370 316 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 PUM1Q14671 1186 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ELP2Q6IA86 826 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 FAM180BQ6P0A1 224 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 FAM180AQ6UWF9 173 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 MS4A15Q8N5U1 240 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF283Q8N7M2 679 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF676Q8N7Q3 588 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 OR52R1Q8NGF1 315 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 RRNAD1Q96FB5 475 aaKnown RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF764Q96H86 408 aaPredicted RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 LPAR4Q99677 370 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 NOSIPQ9Y314 301 aaKnown RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 LRIT2A6NDA9 550 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 DPM1O60762 260 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 SERPINF1P36955 418 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 OPCMLQ14982 345 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ALG10BQ5I7T1 473 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 PRAMEF17Q5VTA0 474 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 GTF2IRD2BQ6EKJ0 949 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 WBP2NLQ6ICG8 309 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 GTF2IRD2Q86UP8 949 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 FOXRED2Q8IWF2 684 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CDH26Q8IXH8 852 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 TP53I13Q8NBR0 393 aaPredicted RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 GOT1L1Q8NHS2 421 aaPredicted RBP8.13□□□□□ -1.11
PDE6A-204ENST00000613228 TMEM163Q8TC26 289 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 TMEM239Q8WW34 195 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 CDS1Q92903 461 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 TBC1D20Q96BZ9 403 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 EXTL2Q9UBQ6 330 aa8.13□□□□□ -1.11
PDE6A-204ENST00000613228 EFCAB7A8K855 629 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 AGAP14A8MT82 685 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 NPIPB8E9PQR5 432 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 EMX1Q04741 257 aaPredicted RBP8.12□□□□□ -1.11
PDE6A-204ENST00000613228 GPR18Q14330 331 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TCTN1Q2MV58 587 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 C4orf46Q504U0 113 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 NHSL2Q5HYW2 709 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 SCARB1Q8WTV0 552 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 ABCG5Q9H222 651 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TMEM185BQ9H7F4 350 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 LRIT1Q9P2V4 623 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 SLC7A7Q9UM01 511 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 ICKQ9UPZ9 632 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 SIT1Q9Y3P8 196 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 METTL15A6NJ78 407 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 PRODHO43272 600 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TFP02787 698 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TACR1P25103 407 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 HSD11B2P80365 405 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 SPHARQ15513 63 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 NSDHLQ15738 373 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TBCEQ15813 527 aaPredicted RBP8.12□□□□□ -1.11
PDE6A-204ENST00000613228 DEFB133Q30KQ1 61 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 C14orf28Q4W4Y0 310 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 ZNF542PQ5EBM4 170 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 C6orf132Q5T0Z8 1188 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 TMEM184AQ6ZMB5 413 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 QSOX2Q6ZRP7 698 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 LURAP1LQ8IV03 231 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 CARFQ8N187 725 aa8.12□□□□□ -1.11
PDE6A-204ENST00000613228 OR2T4Q8NH00 348 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms