RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ACTBP60709 375 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ACTG1P63261 375 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 SLC22A10Q63ZE4 541 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 NOXA1Q86UR1 476 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 VN1R2Q8NFZ6 395 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 PDXPQ96GD0 296 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 AMDHD1Q96NU7 426 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TAS2R8Q9NYW2 309 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 RASD1Q9Y272 281 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 I6L893 689 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 BRINP1O60477 761 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 REEP5Q00765 189 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 AIMP2Q13155 320 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF77Q15935 545 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 COL28A1Q2UY09 1125 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TMEM64Q6YI46 380 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 MEPCEQ7L2J0 689 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 MFSD8Q8NHS3 518 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 CHTF18Q8WVB6 975 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ARHGAP9Q9BRR9 750 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 DPCDQ9BVM2 203 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 MED20Q9H944 212 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 NRAPQ86VF7 1730 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 hCG_1807616A0A1W2PRN6 198 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 SLC5A10A0PJK1 596 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 BCAT2O15382 392 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 LSSP48449 732 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 MALLQ13021 153 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 PCGF3Q3KNV8 242 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 SNAPC3Q92966 411 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 LOC105369274A0A096LPK9 316 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 H3BNC9 293 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 M0R036 132 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 PLPP1O14494 284 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ACP2P11117 423 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 BCL7AQ4VC05 210 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR4N4Q8N0Y3 316 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 SLC16A11Q8NCK7 471 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR6T1Q8NGN1 323 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 NEURL3Q96EH8 262 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 MAP3K3Q99759 626 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TNFRSF12AQ9NP84 129 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 PRMT8Q9NR22 394 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 PLEK2Q9NYT0 353 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 GGT3PA6NGU5 568 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 H7C417 338 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 GFRA2O00451 464 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF35P13682 527 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TNFSF8P32971 234 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 CAV3P56539 151 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 WBP2NLQ6ICG8 309 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 DLEU7Q6UYE1 221 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF417Q8TAU3 575 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 NIPSNAP1Q9BPW8 284 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF416Q9BWM5 594 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF576Q9H609 170 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 KCNS2Q9ULS6 477 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF337Q9Y3M9 751 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 HOXC11O43248 304 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 BCL6P41182 706 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 FOLR3P41439 243 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 RSU1Q15404 277 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 SF3B4Q15427 424 aaKnown RBP eCLIP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TMEM52BQ4KMG9 183 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 LHX8Q68G74 356 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF595Q8IYB9 648 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR13H1Q8NG92 308 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TCTN2Q96GX1 697 aa11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 MEPEQ9NQ76 525 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 TESQ9UGI8 421 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-206ENST00000612899 H0Y8X5 98 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 APOC3P02656 99 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF28P17035 718 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 PIGAP37287 484 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 RAB38P57729 211 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 MLLT11Q13015 90 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 METRNLQ641Q3 311 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR7E24Q6IFN5 339 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 FAM71E1Q6IPT2 247 aa11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF704Q6ZNC4 412 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-206ENST00000612899 IL17RCQ8NAC3 791 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms