RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 TFECO14948 347 aaPredicted RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 CST1P01037 141 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 PEPDP12955 493 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 SHC1P29353 583 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 RRM2P31350 389 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 HSF1Q00613 529 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ALDH6A1Q02252 535 aaKnown RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 KLRB1Q12918 225 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 LAPTM4AQ15012 233 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 SLC25A53Q5H9E4 307 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 C1QL3Q5VWW1 255 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 RAET1LQ5VY80 246 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 TMEM179BQ7Z7N9 219 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ST8SIA1Q92185 356 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 SNRNP40Q96DI7 357 aaKnown RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 BARD1Q99728 777 aaKnown RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 PKP2Q99959 881 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 FNDC11Q9BVV2 318 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 EVA1AQ9H8M9 152 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 NTN4Q9HB63 628 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 RPS6KB2Q9UBS0 482 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 B4GALT7Q9UBV7 327 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 FREM3P0C091 2139 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TMED7-TICAM2A0A0A6YYA0 188 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TRBV4-1A0A0J9YWV2 114 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TMEM72A0PK05 275 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 H0YC42 278 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ACOT7O00154 380 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 OR5F1O95221 314 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TPD52P55327 224 aaPredicted RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 SPIBQ01892 262 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 SEC23BQ15437 767 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 DCST1Q5T197 706 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 OR2T5Q6IEZ7 315 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ZNF613Q6PF04 617 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ULK3Q6PHR2 472 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TRILQ7L0X0 811 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 GRINAQ7Z429 371 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 MEX3DQ86XN8 651 aaKnown RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 GTPBP8Q8N3Z3 284 aaPredicted RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 PIK3C3Q8NEB9 887 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 OR2T29Q8NH02 315 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TMEM234Q8WY98 164 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 SLC38A4Q969I6 547 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 OR11A1Q9GZK7 315 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 TMED7Q9Y3B3 224 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 MRPS18CQ9Y3D5 142 aaKnown RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 IGKV1D-42A0A075B6H8 117 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 A0A087WZY1 265 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 SFTPCP11686 197 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 UQCRBP14927 111 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ITGA2P17301 1181 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 GFRA1P56159 465 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 DLX5P56178 289 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 C19orf57Q0VDD7 668 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 NFATC3Q12968 1075 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 LINC00114Q6XXX2 140 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ZBTB8AQ96BR9 441 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 MRGPRX4Q96LA9 322 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ACKR4Q9NPB9 350 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
CLK4-215ENST00000611733 MAGED1Q9Y5V3 778 aaPredicted RBP10.89□□□□□ -0.67
CLK4-215ENST00000611733 A0A087WUJ7 227 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 FAM47E-STBD1D6RA91 191 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 H0YHG0 523 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 H3BML4 177 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 CLOCKO15516 846 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 BAG2O95816 211 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 H1F0P07305 194 aaKnown RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 POLR2HP52434 150 aaKnown RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 MLLT10P55197 1068 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 EGR4Q05215 589 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 ST3GAL3Q11203 375 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 ANKRD34AQ69YU3 496 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 PODNL1Q6PEZ8 512 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 CYP4Z1Q86W10 505 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 HS3ST5Q8IZT8 346 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 SLC7A13Q8TCU3 470 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 DNAJA4Q8WW22 397 aaPredicted RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 WBP1Q96G27 269 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 DHRS1Q96LJ7 313 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 SFXN2Q96NB2 322 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 ZNF347Q96SE7 839 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 FUZQ9BT04 418 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 HHATLQ9HCP6 504 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 SPRR3Q9UBC9 169 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
CLK4-215ENST00000611733 LYVE1Q9Y5Y7 322 aa10.88□□□□□ -0.67
CLK4-215ENST00000611733 A0A087WUU8 490 aa10.87□□□□□ -0.67
CLK4-215ENST00000611733 HNRNPRO43390 633 aaKnown RBP10.87□□□□□ -0.67
CLK4-215ENST00000611733 CHP2O43745 196 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms