RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SUCLG1P53597 346 aaKnown RBP19.57■□□□□ 0.72
CBWD3-207ENST00000611426 MANFP55145 182 aaKnown RBP19.57■□□□□ 0.72
CBWD3-207ENST00000611426 TPD52P55327 224 aaPredicted RBP19.57■□□□□ 0.72
CBWD3-207ENST00000611426 RBBP4Q09028 425 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 VMACQ2NL98 169 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 GLYR1Q49A26 553 aaPredicted RBP19.57■□□□□ 0.72
CBWD3-207ENST00000611426 SAXO2Q658L1 398 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 PTOV1Q86YD1 416 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 NUP43Q8NFH3 380 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 SFXN5Q8TD22 340 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 FIG4Q92562 907 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 SLCO4A1Q96BD0 722 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 PINK1Q9BXM7 581 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 CXorf36Q9H7Y0 433 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 GPATCH2Q9NW75 528 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 AP4S1Q9Y587 144 aa19.57■□□□□ 0.72
CBWD3-207ENST00000611426 CXCR6O00574 342 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 GMFGO60234 142 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 GMNNO75496 209 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 IGKV1D-16P01601 117 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 HRGP04196 525 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 ERFP50548 548 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 PRR5P85299 388 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 CYP51A1Q16850 503 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 GRAMD1BQ3KR37 738 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 APOOLQ6UXV4 268 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 SZRD1Q7Z422 152 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 CDRT4Q8N9R6 151 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 SLC9A6Q92581 669 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 TMEM38AQ9H6F2 299 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 RIMS3Q9UJD0 308 aa19.56■□□□□ 0.72
CBWD3-207ENST00000611426 IGLV3-32A0A0A0MS00 114 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 NKX2-2O95096 273 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 ATE1O95260 518 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 PSMA4P25789 261 aaKnown RBP19.55■□□□□ 0.72
CBWD3-207ENST00000611426 PCGF2P35227 344 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 CLDN20P56880 219 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 TXNL4AP83876 142 aaKnown RBP19.55■□□□□ 0.72
CBWD3-207ENST00000611426 FAM27E3Q08E93 113 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 VWA1Q6PCB0 445 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 LRRC74BQ6ZQY2 392 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 BTLAQ7Z6A9 289 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 CANT1Q8WVQ1 401 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 NRG4Q8WWG1 115 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 SMPDL3BQ92485 455 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 HOXB13Q92826 284 aaPredicted RBP19.55■□□□□ 0.72
CBWD3-207ENST00000611426 MOAP1Q96BY2 351 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 NTMQ9P121 344 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 ACANP16112 2415 aa19.55■□□□□ 0.72
CBWD3-207ENST00000611426 GSTA4O15217 222 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 NCK1P16333 377 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 VHLP40337 213 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 MAP3K8P41279 467 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 KIR2DL2P43627 348 aaPredicted RBP19.54■□□□□ 0.72
CBWD3-207ENST00000611426 RPS3AP61247 264 aaKnown RBP19.54■□□□□ 0.72
CBWD3-207ENST00000611426 SIRPAP78324 504 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 DEFB113Q30KQ7 82 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 GALNT10Q86SR1 603 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 FNDC9Q8TBE3 224 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 ZNF845Q96IR2 970 aaPredicted RBP19.54■□□□□ 0.72
CBWD3-207ENST00000611426 PIF1Q9H611 641 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 DCAF13Q9NV06 445 aaKnown RBP19.54■□□□□ 0.72
CBWD3-207ENST00000611426 ZNF175Q9Y473 711 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 AP4B1Q9Y6B7 739 aa19.54■□□□□ 0.72
CBWD3-207ENST00000611426 NIPBLQ6KC79 2804 aaeCLIP19.53■□□□□ 0.72
CBWD3-207ENST00000611426 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 RNF103-CHMP3A0A140T963 221 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 NDUFB5O43674 189 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 C1QCP02747 245 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 FCGR1AP12314 374 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 FOXD4Q12950 439 aaPredicted RBP19.53■□□□□ 0.72
CBWD3-207ENST00000611426 PON3Q15166 354 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 SGCBQ16585 318 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 SLC30A8Q8IWU4 369 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 LILRA2Q8N149 483 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 C11orf65Q8NCR3 313 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 OR4C3Q8NH37 302 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 FBXO30Q8TB52 745 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 GIMAP5Q96F15 307 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 MS4A4EQ96PG1 132 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 OPN3Q9H1Y3 402 aaPredicted RBP19.53■□□□□ 0.72
CBWD3-207ENST00000611426 RNF122Q9H9V4 155 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 VDAC3Q9Y277 283 aa19.53■□□□□ 0.72
CBWD3-207ENST00000611426 SHISA8B8ZZ34 492 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 ALG1L2C9J202 215 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 EMC8O43402 210 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 BAG2O95816 211 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 CHI3L1P36222 383 aaPredicted RBP19.52■□□□□ 0.72
CBWD3-207ENST00000611426 CD79BP40259 229 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 ADAM8P78325 824 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 TMEM44Q2T9K0 475 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.52■□□□□ 0.72
CBWD3-207ENST00000611426 GCNT6Q5T4J0 391 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 BHLHB9Q6PI77 547 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 FIGNL1Q6PIW4 674 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 ZNF474Q6S9Z5 364 aaPredicted RBP19.52■□□□□ 0.72
CBWD3-207ENST00000611426 SLC16A11Q8NCK7 471 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 MIPOL1Q8TD10 442 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 WFIKKN1Q96NZ8 548 aa19.52■□□□□ 0.72
CBWD3-207ENST00000611426 MAGIXQ9H6Y5 334 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms