RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 TRMT10CQ7L0Y3 403 aaKnown RBP13.91□□□□□ -0.18
HDDC2-203ENST00000608284 ARIH2OSQ8N7S6 290 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 MNS1Q8NEH6 495 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 PIGXQ8TBF5 258 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF75CPQ92670 426 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-203ENST00000608284 THUMPD3Q9BV44 507 aaKnown RBP13.91□□□□□ -0.18
HDDC2-203ENST00000608284 C1QTNF6Q9BXI9 259 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 LAT2Q9GZY6 243 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 PARPBPQ9NWS1 579 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 CCL27Q9Y4X3 112 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 ANK2Q01484 3957 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 G3V2L1 256 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 CFLARO15519 480 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 URI1O94763 535 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-203ENST00000608284 PGRP06401 933 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 LINC00032P0C843 101 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 CPA3P15088 417 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 APOBEC1P41238 236 aaKnown RBP13.9□□□□□ -0.18
HDDC2-203ENST00000608284 MAGEA8P43361 318 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 NDUFAF6Q330K2 333 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 RFTN2Q52LD8 501 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-203ENST00000608284 KLHL24Q6TFL4 600 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 DDIASQ8IXT1 998 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF563Q8TA94 476 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 MUS81Q96NY9 551 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 QRSL1Q9H0R6 528 aaKnown RBP13.9□□□□□ -0.18
HDDC2-203ENST00000608284 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 MYOZ1Q9NP98 299 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-203ENST00000608284 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
HDDC2-203ENST00000608284 IGKV3D-15A0A087WSY6 115 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 A0A1W2PR80 420 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 ANKRD28O15084 1053 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 H6PDO95479 791 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 WNT11O96014 354 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 AK1P00568 194 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 CSTAP01040 98 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 TGFAP01135 160 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 IGFBP5P24593 272 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 SESN3P58005 492 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 SNRPD2P62316 118 aaKnown RBP13.89□□□□□ -0.19
HDDC2-203ENST00000608284 PHC1P78364 1004 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 SPOCK1Q08629 439 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 EXOSC6Q5RKV6 272 aaKnown RBP13.89□□□□□ -0.19
HDDC2-203ENST00000608284 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDDC2-203ENST00000608284 EIF3MQ7L2H7 374 aaKnown RBP13.89□□□□□ -0.19
HDDC2-203ENST00000608284 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 FBXO17Q96EF6 278 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 FCRL1Q96LA6 429 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 NMUR2Q9GZQ4 415 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 SIRT3Q9NTG7 399 aaPredicted RBP13.89□□□□□ -0.19
HDDC2-203ENST00000608284 ACER3Q9NUN7 267 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 MID2Q9UJV3 735 aa13.89□□□□□ -0.19
HDDC2-203ENST00000608284 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 VSTM5A8MXK1 200 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 ETV2O00321 342 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 SCAMP2O15127 329 aaKnown RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 DNPH1O43598 174 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 BCKDHAP12694 445 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 GCAP28676 217 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 NR4A2P43354 598 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 PRPS1P60891 318 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 GPR68Q15743 365 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 GABRA6Q16445 453 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 PDZK1Q5T2W1 519 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 LIPMQ5VYY2 423 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 SFXN5Q8TD22 340 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 PPP3R2Q96LZ3 170 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 VRK1Q99986 396 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 NAA11Q9BSU3 229 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-203ENST00000608284 OXSMQ9NWU1 459 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 TRAF6Q9Y4K3 522 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 PTGDR2Q9Y5Y4 395 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 FREM1Q5H8C1 2179 aa13.88□□□□□ -0.19
HDDC2-203ENST00000608284 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
HDDC2-203ENST00000608284 RIPK2O43353 540 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 TCF21O43680 179 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 STX11O75558 287 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 LYPLA1O75608 230 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-203ENST00000608284 PMS2P2O95744 297 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 PROCP04070 461 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 ERCC1P07992 297 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-203ENST00000608284 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-203ENST00000608284 EDNRAP25101 427 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 OR2B6P58173 313 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 CASP12Q6UXS9 341 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 B3GLCTQ6Y288 498 aa13.87□□□□□ -0.19
HDDC2-203ENST00000608284 RNF165Q6ZSG1 346 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms