RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ETS2P15036 469 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 GPX2P18283 190 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 IL11P20809 199 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 ADSLP30566 484 aaPredicted RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 KIR2DL2P43627 348 aaPredicted RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 AGFG1P52594 562 aaKnown RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 ARFIP2P53365 341 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 CTBP2P56545 445 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 RAC3P60763 192 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 TLE4Q04727 773 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 TMEM176BQ3YBM2 270 aaPredicted RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 PPP4R4Q6NUP7 873 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 ZNF550Q7Z398 422 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 KRT73Q86Y46 540 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 MSRB3Q8IXL7 192 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 RNF128Q8TEB7 428 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 CNOT9Q92600 299 aaKnown RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 STARD4Q96DR4 205 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 SLC39A3Q9BRY0 314 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 CCDC106Q9BWC9 280 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 TMEM38AQ9H6F2 299 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 GALNT8Q9NY28 637 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 VAPAQ9P0L0 249 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.21■□□□□ 0.35
SRSF4-206ENST00000605204 CHRNA9Q9UGM1 479 aa17.21■□□□□ 0.35
SRSF4-206ENST00000605204 NF1P21359 2839 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 TUBAL3A6NHL2 446 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 DNPH1O43598 174 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 SMNDC1O75940 238 aaKnown RBP eCLIP17.2■□□□□ 0.341e-10■□□□□ 8.8
SRSF4-206ENST00000605204 RYKP34925 604 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 MDH1P40925 334 aaKnown RBP17.2■□□□□ 0.34
SRSF4-206ENST00000605204 RIPPLY3P57055 190 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 CSNK2A1P68400 391 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-206ENST00000605204 GUCY1A3Q02108 690 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 MAPRE2Q15555 327 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 SYT14P1Q58G82 188 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 COQ5Q5HYK3 327 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 PLXDC2Q6UX71 529 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 DHDDSQ86SQ9 333 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 LUZP2Q86TE4 346 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 SPATA5L1Q9BVQ7 753 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 SPATA9Q9BWV2 254 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 KLHL14Q9P2G3 628 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 PROCRQ9UNN8 238 aa17.2■□□□□ 0.34
SRSF4-206ENST00000605204 ZNF443Q9Y2A4 671 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-206ENST00000605204 MED12Q93074 2177 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 EFNA2O43921 213 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 PGM3O95394 542 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 ARAFP10398 606 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 SHC1P29353 583 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 SLC1A3P43003 542 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 PLAURQ03405 335 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 REEP3Q6NUK4 255 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 DLEU7Q6UYE1 221 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 COQ10BQ9H8M1 238 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 SLAMF8Q9P0V8 285 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 HDGFL3Q9Y3E1 203 aa17.19■□□□□ 0.34
SRSF4-206ENST00000605204 BBIP1A8MTZ0 92 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 SLC22A2O15244 555 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 BCAS1O75363 584 aaPredicted RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 OPN1LWP04000 364 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 CPOXP36551 454 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 IDH2P48735 452 aaKnown RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 POLR2HP52434 150 aaKnown RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 COPZ1P61923 177 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 SIRPAP78324 504 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 CDK6Q00534 326 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 EPS8Q12929 822 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 VWA1Q6PCB0 445 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 BTLAQ7Z6A9 289 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 STK32CQ86UX6 486 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 BHLHE22Q8NFJ8 381 aaPredicted RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 ZHX1-C8orf76Q96EF9 292 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 OR5B2Q96R09 309 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 CPPED1Q9BRF8 314 aaPredicted RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 EVA1AQ9H8M9 152 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 KLHL9Q9P2J3 617 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 MTORP42345 2549 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 MED13LQ71F56 2210 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 HCFC1P51610 2035 aa17.18■□□□□ 0.34
SRSF4-206ENST00000605204 SETD2Q9BYW2 2564 aaPredicted RBP17.18■□□□□ 0.34
SRSF4-206ENST00000605204 DOCK7Q96N67 2140 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 PRORSD1PA6NEY8 169 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 ZNF208O43345 1280 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 NPPAP01160 153 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 CGAP01215 116 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 SLC6A2P23975 617 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 PRKAR1BP31321 381 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 RBBP4Q09028 425 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 NFYCQ13952 458 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 RUNDC3AQ59EK9 446 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 ZNF311Q5JNZ3 666 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 TMEM201Q5SNT2 666 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 ZNF836Q6ZNA1 936 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 TMPPEQ6ZT21 453 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 FCRLAQ7L513 359 aa17.17■□□□□ 0.34
SRSF4-206ENST00000605204 VRK2Q86Y07 508 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms