RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 C12orf49Q9H741 205 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 MED4Q9NPJ6 270 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 TMEM45AQ9NWC5 275 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 LEF1Q9UJU2 399 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF443Q9Y2A4 671 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 NDUFAF1Q9Y375 327 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ANKRD17O75179 2603 aaKnown RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 PDZD2O15018 2839 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 A0A0G2JPF8 293 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 CFAP73A6NFT4 308 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 EVPLLA8MZ36 301 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 HNRNPCL2B2RXH8 293 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 HNRNPCL3B7ZW38 293 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 ANGPT2O15123 496 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
TUBE1-208ENST00000604743 CGAP01215 116 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 HNRNPCL4P0DMR1 293 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 POU2F1P14859 743 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 ENPP1P22413 925 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 APOBEC1P41238 236 aaKnown RBP12.88□□□□□ -0.35
TUBE1-208ENST00000604743 SORDQ00796 357 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 LARS2Q15031 903 aaKnown RBP12.88□□□□□ -0.35
TUBE1-208ENST00000604743 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 GCNT6Q5T4J0 391 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 FBXW10Q5XX13 1052 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF474Q6S9Z5 364 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-208ENST00000604743 FCRLAQ7L513 359 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 DHDDSQ86SQ9 333 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 C10orf111Q8N326 155 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 NFKBIDQ8NI38 313 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 FAM222BQ8WU58 562 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
TUBE1-208ENST00000604743 CCDC106Q9BWC9 280 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 A4GALTQ9NPC4 353 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 AKAP6Q13023 2319 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 DSPPQ9NZW4 1301 aa12.88□□□□□ -0.35
TUBE1-208ENST00000604743 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CDHR4A6H8M9 788 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SULT2B1O00204 365 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-208ENST00000604743 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CD8BP10966 210 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 EPXP11678 715 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 UQCRBP14927 111 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 PPIBP23284 216 aaKnown RBP12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CD79BP40259 229 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 RAC3P60763 192 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 EPS8Q12929 822 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF311Q5JNZ3 666 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 TMEM201Q5SNT2 666 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CGB2Q6NT52 195 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 DLEU7Q6UYE1 221 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CLIP4Q8N3C7 705 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CADM2Q8N3J6 435 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 OR6K3Q8NGY3 331 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 RNF128Q8TEB7 428 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 IKZF5Q9H5V7 419 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 GLRX2Q9NS18 164 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-208ENST00000604743 ABCA4P78363 2273 aa12.87□□□□□ -0.35
TUBE1-208ENST00000604743 TRBV5-3A0A0A0MS03 114 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 TMED7-TICAM2A0A0A6YYA0 188 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 SH3D21A4FU49 640 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 PRKD3O94806 890 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 PGM3O95394 542 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 ARAFP10398 606 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 BMP2P12643 396 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 KLK2P20151 261 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 TACR3P29371 465 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 AGTR1P30556 359 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 DIO1P49895 249 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 CDK6Q00534 326 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 NFYCQ13952 458 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
TUBE1-208ENST00000604743 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 METTL21CQ5VZV1 264 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 TMPPEQ6ZT21 453 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF440Q8IYI8 595 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 SLC25A43Q8WUT9 341 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-208ENST00000604743 NRGNQ92686 78 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF775Q96BV0 537 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-208ENST00000604743 ARL5BQ96KC2 179 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-208ENST00000604743 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
TUBE1-208ENST00000604743 ARMC7Q9H6L4 198 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms