RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PGAM5Q96HS1 289 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF599Q96NL3 588 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PPIL3Q9H2H8 161 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 HEXA-AS1Q9H8Q6 139 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 OR2S2Q9NQN1 319 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CRIM1Q9NZV1 1036 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 APOBEC3BQ9UH17 382 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 WASF3Q9UPY6 502 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TRAPPC4Q9Y296 219 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 IGSF9BQ9UPX0 1349 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 EXOC1LA0A1B0GW35 172 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 A0A1W2PPQ1 181 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TIMM8AO60220 97 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 AHSA1O95433 338 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ANGPTL1O95841 491 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TXNDC12O95881 172 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 CST1P01037 141 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FGF2P09038 288 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ARSAP15289 507 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RPS19P39019 145 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FEN1P39748 380 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 BRCC3P46736 316 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 MRPL19P49406 292 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 MMP15P51511 669 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 CEBPGP53567 150 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RBX1P62877 108 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TNFRSF9Q07011 255 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SPOCK1Q08629 439 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SREBF2Q12772 1141 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 GK2Q14410 553 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 NFATC4Q14934 902 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SOWAHAQ2M3V2 549 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF404Q494X3 552 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 XKR7Q5GH72 579 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RBM48Q5RL73 367 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM46CQ5VWP2 391 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FIGLAQ6QHK4 219 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RASSF6Q6ZTQ3 369 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TMPRSS11FQ6ZWK6 438 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 HSD17B13Q7Z5P4 300 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 NRARPQ7Z6K4 114 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM17Q86X19 198 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ATPAF2Q8N5M1 289 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PARP16Q8N5Y8 322 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PTGR2Q8N8N7 351 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SMG8Q8ND04 991 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 MARCH1Q8TCQ1 289 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 WIPF2Q8TF74 440 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 COQ8BQ96D53 544 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 C12orf42Q96LP6 360 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 KLF6Q99612 283 aaPredicted RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 DPH7Q9BTV6 452 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TRMOQ9BU70 441 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RBM24Q9BX46 236 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 NXF2Q9GZY0 626 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SDCBP2Q9H190 292 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM96AQ9H5X1 160 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PARD6AQ9NPB6 346 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ENTPD7Q9NQZ7 604 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SIRT7Q9NRC8 400 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM49BQ9NUQ9 324 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 AP5S1Q9NUS5 200 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SMPD4Q9NXE4 827 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TAS2R14Q9NYV8 317 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ABI3Q9P2A4 366 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 HACL1Q9UJ83 578 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SCP2D1Q9UJQ7 156 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF225Q9UK10 706 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 KCNIP3Q9Y2W7 256 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC6A5Q9Y345 797 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SF3B6Q9Y3B4 125 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 DENND4AQ7Z401 1863 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 LOC105369274A0A096LPK9 316 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 LOC102723532A0A0G2JNH3 316 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 TCRBV7S2A1N4TA0A589 114 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM149AA5PLN7 773 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM74A7A6NL05 159 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 WIPF1O43516 503 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SDC3O75056 442 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 F10P00742 488 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 GAPDHP04406 335 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ANXA5P08758 320 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 C1QTNF9P0C862 333 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FCGR2AP12318 317 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 IL2RBP14784 551 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 HLA-GP17693 338 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RPS3P23396 243 aaKnown RBP eCLIP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 GTF2E2P29084 291 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 RARRES1P49788 294 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 MRPS11P82912 194 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ID3Q02535 119 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 CXCL9Q07325 125 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PTPRCAPQ14761 206 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SHBQ15464 509 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM74A3Q4VXF1 159 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 PIGGQ5H8A4 983 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 LGSNQ5TDP6 509 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 SPNS3Q6ZMD2 512 aa4.63□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF841Q6ZN19 808 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms