RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
IRF3-226ENST00000600453 RAD21L1Q9H4I0 556 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 C12orf49Q9H741 205 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 COQ10BQ9H8M1 238 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 CACYBPQ9HB71 228 aaKnown RBP13.95□□□□□ -0.18
IRF3-226ENST00000600453 NGBQ9NPG2 151 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 C6orf203Q9P0P8 240 aaPredicted RBP13.95□□□□□ -0.18
IRF3-226ENST00000600453 HDGFL3Q9Y3E1 203 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
IRF3-226ENST00000600453 A0A1W2PNR3 127 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 FAM234BA2RU67 622 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 POLR3GO15318 223 aaPredicted RBP13.94□□□□□ -0.18
IRF3-226ENST00000600453 TFPIP10646 304 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 CDKN2CP42773 168 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 CRATP43155 626 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 NR1H2P55055 460 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
IRF3-226ENST00000600453 RASGEF1BQ0VAM2 473 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 FUT5Q11128 374 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 SYPL1Q16563 259 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 OLIG3Q7RTU3 272 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 ZNF550Q7Z398 422 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 MTDHQ86UE4 582 aaKnown RBP13.94□□□□□ -0.18
IRF3-226ENST00000600453 ANKFN1Q8N957 763 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 DYDC1Q8WWB3 177 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 QRSL1Q9H0R6 528 aaKnown RBP13.94□□□□□ -0.18
IRF3-226ENST00000600453 SLC38A1Q9H2H9 487 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 TPT1P8Q9HAU6 139 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 BCO1Q9HAY6 547 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 ARGLU1Q9NWB6 273 aaPredicted RBP13.94□□□□□ -0.18
IRF3-226ENST00000600453 P2RX2Q9UBL9 471 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 ZNF232Q9UNY5 417 aa13.94□□□□□ -0.18
IRF3-226ENST00000600453 CENPVL1A0A0U1RR11 272 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 PRAMEF27A3QJZ7 478 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 ZNF724A8MTY0 619 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 C9JVG2 144 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 FAAHO00519 579 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 DNPH1O43598 174 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 CYTIPO60759 359 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 CNOT4O95628 575 aaKnown RBP13.93□□□□□ -0.18
IRF3-226ENST00000600453 CCKARP32238 428 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
IRF3-226ENST00000600453 MRPL19P49406 292 aaKnown RBP13.93□□□□□ -0.18
IRF3-226ENST00000600453 DIO1P49895 249 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 CRISP3P54108 245 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 PDK3Q15120 406 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 HDXQ7Z353 690 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 HSD17B8Q92506 261 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 TMUB1Q9BVT8 246 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 ACTR6Q9GZN1 396 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 TCF7L2Q9NQB0 619 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 CTPS2Q9NRF8 586 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 TMEM45AQ9NWC5 275 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 EMC3Q9P0I2 261 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 TRAPPC4Q9Y296 219 aa13.93□□□□□ -0.18
IRF3-226ENST00000600453 A0A0G2JPF8 293 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 CFAP73A6NFT4 308 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 HNRNPCL2B2RXH8 293 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 HNRNPCL3B7ZW38 293 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ARHGEF9O43307 516 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ZNF208O43345 1280 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
IRF3-226ENST00000600453 PMS2P2O95744 297 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 CHRM4P08173 479 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 HNRNPCL4P0DMR1 293 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 CD53P19397 219 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 IL32P24001 234 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 SLC1A3P43003 542 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 RIPPLY3P57055 190 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ITGADQ13349 1161 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ACKR1Q16570 336 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 COX20Q5RI15 118 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 C6orf10Q5SRN2 563 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 SFRP5Q5T4F7 317 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 TFAP2EQ6VUC0 442 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 C20orf204Q6ZNR8 217 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 NUFIP2Q7Z417 695 aaKnown RBP13.92□□□□□ -0.18
IRF3-226ENST00000600453 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 GALNT5Q7Z7M9 940 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ADGRG3Q86Y34 549 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 GABRG1Q8N1C3 465 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 PNPT1Q8TCS8 783 aaKnown RBP13.92□□□□□ -0.18
IRF3-226ENST00000600453 ZNF524Q96C55 264 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 DDIT4LQ96D03 193 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 PSD2Q9BQI7 771 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 CCDC28BQ9BUN5 200 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 FREM1Q5H8C1 2179 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 ARID1AO14497 2285 aa13.92□□□□□ -0.18
IRF3-226ENST00000600453 CELSR1Q9NYQ6 3014 aa13.91□□□□□ -0.18
IRF3-226ENST00000600453 HMGB1P1B2RPK0 211 aaPredicted RBP13.91□□□□□ -0.18
IRF3-226ENST00000600453 GPR171O14626 319 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms