RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ARMC10Q8N2F6 343 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 ZNF786Q8N393 782 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 OR52L1Q8NGH7 329 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 DUSP19Q8WTR2 217 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 TRUB1Q8WWH5 349 aaKnown RBP11.66□□□□□ -0.54
ZNF548-210ENST00000600442 SH3YL1Q96HL8 342 aaPredicted RBP11.66□□□□□ -0.54
ZNF548-210ENST00000600442 HRASLS5Q96KN8 279 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 Q96MT0 163 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 MUS81Q96NY9 551 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 SLC38A2Q96QD8 506 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 WFDC6Q9BQY6 131 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 RSPO3Q9BXY4 272 aaPredicted RBP11.66□□□□□ -0.54
ZNF548-210ENST00000600442 BATF3Q9NR55 127 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 MAN2C1Q9NTJ4 1040 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
ZNF548-210ENST00000600442 TMEM200CA6NKL6 621 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SNTNA6NMZ2 147 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 B8ZZF3 427 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 PYCARD-AS1I3L0S3 204 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 TERTO14746 1132 aaKnown RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 KLK10O43240 276 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 MITFO75030 526 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SNX4O95219 450 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 NADKO95544 446 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 IGF2P01344 180 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 LYNP07948 512 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SAGP10523 405 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 FKBP2P26885 142 aaKnown RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 RNF144AP50876 292 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 POLR2HP52434 150 aaKnown RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 CTBP2P56545 445 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 PRKCDQ05655 676 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 CD226Q15762 336 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ZNF791Q3KP31 576 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ZNF691Q5VV52 312 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SLC22A10Q63ZE4 541 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 TMEM81Q6P7N7 255 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 KLHL17Q6TDP4 642 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 USP51Q70EK9 711 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ZER1Q7Z7L7 766 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 P3H2Q8IVL5 708 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 NRMQ8IXM6 262 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 CLDN22Q8N7P3 220 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 TMEM255BQ8WV15 326 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 KCNE4Q8WWG9 221 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ST8SIA1Q92185 356 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 HGDQ93099 445 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 BPIFA2Q96DR5 249 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 ARSGQ96EG1 525 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 NIPSNAP1Q9BPW8 284 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 TMEM43Q9BTV4 400 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 PRR14Q9BWN1 585 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 LHPPQ9H008 270 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 VCX3AQ9NNX9 186 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 NDRG4Q9ULP0 352 aaKnown RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SPIN1Q9Y657 262 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 COL27A1Q8IZC6 1860 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SEC16AO15027 2179 aa11.65□□□□□ -0.54
ZNF548-210ENST00000600442 SCN2AQ99250 2005 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 A0A087WUJ7 227 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 A0A087WZY1 265 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 ANKUB1A6NFN9 424 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 UNC119BA6NIH7 251 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 EFCAB9A8MZ26 197 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HCN1O60741 890 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 BCAS1O75363 584 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-210ENST00000600442 P04436 131 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HMGN1P05114 100 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 IFI30P13284 250 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 GGT2P36268 569 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 SOX3P41225 446 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 EIF1P41567 113 aaKnown RBP11.64□□□□□ -0.55
ZNF548-210ENST00000600442 GSSP48637 474 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 SLC9A3P48764 834 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 CYB561P49447 251 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 ZNF117Q03924 483 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 ANKDD1AQ495B1 522 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 ACER2Q5QJU3 275 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 H3F3CQ6NXT2 135 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 SLC27A4Q6P1M0 643 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 UGT2A3Q6UWM9 527 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 IL20RBQ6UXL0 311 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 C16orf47Q6ZP98 133 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-210ENST00000600442 TMPRSS11FQ6ZWK6 438 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 NKAIN4Q8IVV8 208 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 C10orf53Q8N6V4 93 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 OR4K17Q8NGC6 315 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HDAC2Q92769 488 aaKnown RBP11.64□□□□□ -0.55
ZNF548-210ENST00000600442 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
ZNF548-210ENST00000600442 FAM46AQ96IP4 442 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms