RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IDO1P14902 403 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 EPHA3P29320 983 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 IL12AP29459 219 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 HTR3AP46098 478 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 OR3A2P47893 321 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 DIO1P49895 249 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ITGADQ13349 1161 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 PDK3Q15120 406 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 GPAT3Q53EU6 434 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 SYT14P1Q58G82 188 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ZNF704Q6ZNC4 412 aaPredicted RBP14.04□□□□□ -0.16
VRK3-221ENST00000600284 LRRC74BQ6ZQY2 392 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 Q6ZT83 130 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 SSX8Q7RTT4 187 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 GRINAQ7Z429 371 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 RNF130Q86XS8 419 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 WFDC8Q8IUA0 241 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ARFGAP2Q8N6H7 521 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ZNF563Q8TA94 476 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ZG16BQ96DA0 208 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 PLPPR2Q96GM1 343 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
VRK3-221ENST00000600284 CCDC106Q9BWC9 280 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 MTHFD2LQ9H903 347 aaPredicted RBP14.04□□□□□ -0.16
VRK3-221ENST00000600284 NGBQ9NPG2 151 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 CHRNA9Q9UGM1 479 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 ACANP16112 2415 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 PRAMEF27A3QJZ7 478 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 ZNF814B7Z6K7 855 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
VRK3-221ENST00000600284 DNPH1O43598 174 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 ERLIN1O75477 346 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 KRT75O95678 551 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 ADAP00813 363 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 PAX1P15863 534 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 IL32P24001 234 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 MAP2K6P52564 334 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 NME5P56597 212 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 CHRNEQ04844 493 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 Q5PR19 223 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 ZNF621Q6ZSS3 439 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 MTDHQ86UE4 582 aaKnown RBP14.03□□□□□ -0.16
VRK3-221ENST00000600284 ZNF611Q8N823 705 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 IGFBPL1Q8WX77 278 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 KISS1RQ969F8 398 aaPredicted RBP14.03□□□□□ -0.16
VRK3-221ENST00000600284 POM121Q96HA1 1249 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 GSX2Q9BZM3 304 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 SLC38A1Q9H2H9 487 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 GSX1Q9H4S2 264 aaPredicted RBP14.03□□□□□ -0.16
VRK3-221ENST00000600284 WDR55Q9H6Y2 383 aaPredicted RBP14.03□□□□□ -0.16
VRK3-221ENST00000600284 MANSC1Q9H8J5 431 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 NKIRAS1Q9NYS0 192 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 HDGFL3Q9Y3E1 203 aa14.03□□□□□ -0.16
VRK3-221ENST00000600284 NF1P21359 2839 aa14.02□□□□□ -0.16
VRK3-221ENST00000600284 GOLGA8QA0A0J9YX86 632 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 GOLGA8OA6NCC3 632 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 AGAP5A6NIR3 686 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 FAM171A2A8MVW0 826 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 GOLGA8NF8WBI6 632 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 SLC22A3O75751 556 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 PMS2P2O95744 297 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 INHBBP09529 407 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 KITP10721 976 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 MAGOHP61326 146 aaKnown RBP14.02□□□□□ -0.17
VRK3-221ENST00000600284 GNA13Q14344 377 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 GSTA3Q16772 222 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 PDCD4Q53EL6 469 aaKnown RBP14.02□□□□□ -0.17
VRK3-221ENST00000600284 GALNT5Q7Z7M9 940 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 MGARPQ8TDB4 240 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 ZNF75CPQ92670 426 aaPredicted RBP14.02□□□□□ -0.17
VRK3-221ENST00000600284 ZBTB9Q96C00 473 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 TLCD1Q96CP7 247 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 ZHX1-C8orf76Q96EF9 292 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 INPP5KQ9BT40 448 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 TMBIM4Q9HC24 238 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 CTPS2Q9NRF8 586 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
VRK3-221ENST00000600284 IGKV3D-15A0A087WSY6 115 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 FAAHO00519 579 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 RFXANKO14593 260 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 HS3ST1O14792 307 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 KLF11O14901 512 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 BCAS1O75363 584 aaPredicted RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 FESP07332 822 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ZCCHC18P0CG32 403 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 TFPIP10646 304 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ADSLP30566 484 aaPredicted RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 RYKP34925 604 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 CDKN2CP42773 168 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 TAB1Q15750 504 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 SYPL1Q16563 259 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 NCMAPQ5T1S8 102 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 NXNQ6DKJ4 435 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ABLIM2Q6H8Q1 611 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 MSANTD1Q6ZTZ1 278 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ADGRG3Q86Y34 549 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ANKFN1Q8N957 763 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms