RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ULK3Q6PHR2 472 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF605Q86T29 641 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 ADGRG3Q86Y34 549 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 OR5M1Q8NGP8 315 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 DNAJA4Q8WW22 397 aaPredicted RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 SFXN2Q96NB2 322 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 CTPS2Q9NRF8 586 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 AGPAT4Q9NRZ5 378 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 OSGIN1Q9UJX0 560 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 CPSF4LA6NMK7 179 aaKnown RBP11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 J3KTA2 159 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 ACTL6AO96019 429 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 FABP3P05413 133 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 THRBP10828 461 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 RHCEP18577 417 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 IL11P20809 199 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 FUT4P22083 530 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC7A1P30825 629 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 MAP2K6P52564 334 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 CDH12P55289 794 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 VASNQ6EMK4 673 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 LINC00114Q6XXX2 140 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 GDF7Q7Z4P5 450 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 FGD2Q7Z6J4 655 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 ZDHHC21Q8IVQ6 265 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 OFCC1Q8IZS5 231 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 PIK3C3Q8NEB9 887 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC38A4Q969I6 547 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC41A3Q96GZ6 507 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 PIP5K1AQ99755 562 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 PRSS27Q9BQR3 290 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF426Q9BUY5 554 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 CHID1Q9BWS9 393 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 RIMS3Q9UJD0 308 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 AURKCQ9UQB9 309 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF337Q9Y3M9 751 aa11.42□□□□□ -0.58
CHMP2A-206ENST00000600118 IGKV1D-42A0A075B6H8 117 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A087WUJ7 227 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 TMED7-TICAM2A0A0A6YYA0 188 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 CHP2O43745 196 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 NPIPB7O75200 414 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 C1QL1O75973 258 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 DIRAS1O95057 198 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 MT-ND1P03886 318 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 PNMTP11086 282 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ITGA2P17301 1181 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 BMP7P18075 431 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 YAP1P46937 504 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 LHX2P50458 406 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 MLLT10P55197 1068 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 TAS2R41P59536 307 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 RAC1P63000 192 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 HSF1Q00613 529 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 CRYZQ08257 329 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 SELENBP1Q13228 472 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 BCL2A1Q16548 175 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ALG10BQ5I7T1 473 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 DCST1Q5T197 706 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ARHGAP11AQ6P4F7 1023 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 AAGABQ6PD74 315 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 WDR88Q6ZMY6 472 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF771Q7L3S4 317 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 LSRQ86X29 649 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 GHDCQ8N2G8 530 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 CPT1CQ8TCG5 803 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 RSRC1Q96IZ7 334 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 MPP4Q96JB8 637 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF347Q96SE7 839 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 LDAHQ9H6V9 325 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 NMNAT1Q9HAN9 279 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 SERINC1Q9NRX5 453 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 MAN2C1Q9NTJ4 1040 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 ARMC1Q9NVT9 282 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 RPS6KB2Q9UBS0 482 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 CHRNA9Q9UGM1 479 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 TMED7Q9Y3B3 224 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 FAM32AQ9Y421 112 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 AP4B1Q9Y6B7 739 aa11.41□□□□□ -0.58
CHMP2A-206ENST00000600118 SPENQ96T58 3664 aaKnown RBP11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 HEATR5AQ86XA9 2040 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A1B0GTH9 108 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A1W2PRQ8 180 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 TMEM72A0PK05 275 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 OR14I1A6ND48 311 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF208O43345 1280 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 FKBP6O75344 327 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 EDN3P14138 238 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF708P17019 499 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 FKBP2P26885 142 aaKnown RBP11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 SHC1P29353 583 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 GCKP35557 465 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 STARP49675 285 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 CLDN15P56746 228 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 CLDN18P56856 261 aa11.4□□□□□ -0.58
CHMP2A-206ENST00000600118 ST3GAL3Q11203 375 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 845.6 ms