RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZGRF1	Q86YA3	2104 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A1B0GTH9	108 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	ZNHIT1	O43257	154 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	TPST2	O60704	377 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	HCN1	O60741	890 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	ADAM11	O75078	769 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	HK1	P19367	917 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	TCEA1	P23193	301 aa	Known RBP	19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	YAP1	P46937	504 aa	Known RBP	19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	MRPL49	Q13405	166 aa	Known RBP	19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	QPRT	Q15274	297 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	ARSK	Q6UWY0	536 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	FGD2	Q7Z6J4	655 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	ATCAY	Q86WG3	371 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	CHERP	Q8IWX8	916 aa	Known RBP	19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	GALNT11	Q8NCW6	608 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	NEIL3	Q8TAT5	605 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	PHF10	Q8WUB8	498 aa	Known RBP	19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	ST8SIA1	Q92185	356 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	PIP5K1A	Q99755	562 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	FNDC11	Q9BVV2	318 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	PRR14	Q9BWN1	585 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	SPRR3	Q9UBC9	169 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	VDAC3	Q9Y277	283 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026	DNAJC13	O75165	2243 aa		19.87	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A1B0GVC2	190 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	TRAPPC13	A5PLN9	417 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	GNGT2	O14610	69 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	ZIC3	O60481	467 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	TIPRL	O75663	272 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR5F1	O95221	314 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	CST1	P01037	141 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	FAS	P25445	335 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	HTR2A	P28223	471 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	SLC1A3	P43003	542 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	SMIM11A	P58511	58 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	ARHGAP11A	Q6P4F7	1023 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	ZNF613	Q6PF04	617 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	TSEN54	Q7Z6J9	526 aa	Known RBP	19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	ADAMTS16	Q8TE57	1224 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	CTPS2	Q9NRF8	586 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	ACER3	Q9NUN7	267 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	MED17	Q9NVC6	651 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	RPH3A	Q9Y2J0	694 aa	Predicted RBP	19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026	SLC6A5	Q9Y345	797 aa		19.86	■□□□□ 0.77
LTBP4-227	ENST00000600026		J3KTA2	159 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	AQP7	O14520	342 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	ADAMDEC1	O15204	470 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	SUSD5	O60279	629 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	DEAF1	O75398	565 aa	Predicted RBP	19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	KRT36	O76013	467 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	DIRAS1	O95057	198 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	HTR3A	P46098	478 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	SESN3	P58005	492 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	ST3GAL3	Q11203	375 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	PIN1	Q13526	163 aa	Predicted RBP	19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	TOMM34	Q15785	309 aa	Predicted RBP	19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	PLPPR5	Q32ZL2	321 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	IQCC	Q4KMZ1	466 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR2T5	Q6IEZ7	315 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	ULK3	Q6PHR2	472 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR2T29	Q8NH02	315 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	RNF217	Q8TC41	542 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	DNAJA4	Q8WW22	397 aa	Predicted RBP	19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	ZBTB8A	Q96BR9	441 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	SLC41A3	Q96GZ6	507 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	RIMS3	Q9UJD0	308 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	ACAD8	Q9UKU7	415 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	A4GNT	Q9UNA3	340 aa		19.85	■□□□□ 0.77
LTBP4-227	ENST00000600026	GTF3C1	Q12789	2109 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A1B0GWA3	101 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026		H3BNX3	289 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	CLOCK	O15516	846 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	LDLR	P01130	860 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	THRB	P10828	461 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	PRKCA	P17252	672 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	EIF1	P41567	113 aa	Known RBP	19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	UQCRFS1	P47985	274 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	B3GALT5-AS1	P59052	145 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	SPIB	Q01892	262 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	RBPJ	Q06330	500 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	GLYR1	Q49A26	553 aa	Predicted RBP	19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	RAET1L	Q5VY80	246 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	GRINA	Q7Z429	371 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	OFCC1	Q8IZS5	231 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR5M1	Q8NGP8	315 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	MRGPRX4	Q96LA9	322 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	SFXN2	Q96NB2	322 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	TNFRSF10D	Q9UBN6	386 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	DNAJB9	Q9UBS3	223 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	TESMIN	Q9Y4I5	508 aa		19.84	■□□□□ 0.77
LTBP4-227	ENST00000600026	NAV2	Q8IVL1	2488 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A0B4J2E0	115 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A1B0GX12	115 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	SHISA8	B8ZZ34	492 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	H1F0	P07305	194 aa	Known RBP	19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	GNLY	P22749	145 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	RRM2	P31350	389 aa		19.83	■□□□□ 0.77
LTBP4-227	ENST00000600026	PTGS2	P35354	604 aa		19.83	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms