RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 LILRA2Q8N149 483 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 LSMEM1Q8N8F7 131 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 OR52E4Q8NGH9 312 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 OR6T1Q8NGN1 323 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 VANGL1Q8TAA9 524 aaPredicted RBP12.95□□□□□ -0.34
VRK3-213ENST00000597215 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
VRK3-213ENST00000597215 NSMCE2Q96MF7 247 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 CHRNA9Q9UGM1 479 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 SH3BGRL2Q9UJC5 107 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
VRK3-213ENST00000597215 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
VRK3-213ENST00000597215 SPIN1Q9Y657 262 aaPredicted RBP12.95□□□□□ -0.34
VRK3-213ENST00000597215 BAHCC1Q9P281 2608 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 A0A1B0GUH1 482 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TMEM229AB2RXF0 380 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 SEC14L5O43304 696 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 WISP1O95388 367 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 IL11P20809 199 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
VRK3-213ENST00000597215 ACVR2AP27037 513 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 HTR2AP28223 471 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TACR3P29371 465 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 CLDN20P56880 219 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 ESPNLQ6ZVH7 1005 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 FKBP9P1Q75LS8 142 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 CHMP1BQ7LBR1 199 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 GGNQ86UU5 652 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 LACC1Q8IV20 430 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 OR4D11Q8NGI4 311 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 ZPLD1Q8TCW7 415 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
VRK3-213ENST00000597215 MCUR1Q96AQ8 359 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 C3orf49Q96BT1 292 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 CLPTM1LQ96KA5 538 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 MCHR1Q99705 422 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 WFDC6Q9BQY6 131 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 ADAM19Q9H013 955 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 PCDHAC1Q9H158 963 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TMEM185BQ9H7F4 350 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 DCAF13Q9NV06 445 aaKnown RBP12.94□□□□□ -0.34
VRK3-213ENST00000597215 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 SELENONQ9NZV5 590 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 ACTR3BQ9P1U1 418 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 OSGIN1Q9UJX0 560 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
VRK3-213ENST00000597215 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 EIF1AYO14602 144 aaKnown RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 EFNA2O43921 213 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 TPST2O60704 377 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 STAMBPO95630 424 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 CXCR1P25024 350 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 SLC7A1P30825 629 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 SFTPDP35247 375 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 MAP2K6P52564 334 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 RPS3AP61247 264 aaKnown RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 KCNC4Q03721 635 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 TRIM25Q14258 630 aaKnown RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 OR1Q1Q15612 314 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 NPTX1Q15818 432 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 C4orf17Q53FE4 359 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 MTX3Q5HYI7 312 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 PDSS1Q5T2R2 415 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 C1orf185Q5T7R7 199 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 ADGRG3Q86Y34 549 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 ATP6V1C2Q8NEY4 427 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 OR10Q1Q8NGQ4 319 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 DNAJA4Q8WW22 397 aaPredicted RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 RELTQ969Z4 430 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 CCDC124Q96CT7 223 aaKnown RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 ASB9Q96DX5 294 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 TUBA1CQ9BQE3 449 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 LRMDAQ9H2I8 198 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
VRK3-213ENST00000597215 PAQR5Q9NXK6 330 aaPredicted RBP12.93□□□□□ -0.34
VRK3-213ENST00000597215 E9PLN8 166 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 CCL21O00585 134 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ADAMDEC1O15204 470 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 GSC2O15499 205 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ZNF208O43345 1280 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 OPN1LWP04000 364 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 PNMTP11086 282 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 OR1E2P47887 323 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 SUCLG1P53597 346 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 TMEM176BQ3YBM2 270 aaPredicted RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ALG10BQ5I7T1 473 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms