RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 USB1Q9BQ65 265 aaKnown RBP15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 PSD2Q9BQI7 771 aa15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 CCDC106Q9BWC9 280 aa15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 ACTR6Q9GZN1 396 aa15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 SLC38A1Q9H2H9 487 aa15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 MTHFD2LQ9H903 347 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 SDR39U1Q9NRG7 319 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 ING1Q9UK53 422 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-203ENST00000597209 AGAP5A6NIR3 686 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 ZNF724A8MTY0 619 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 C9JVG2 144 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 RFXANKO14593 260 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 SMAD9O15198 467 aaKnown RBP15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 BCAS1O75363 584 aaPredicted RBP15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 ZCCHC18P0CG32 403 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 CLK1P49759 484 aaKnown RBP15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 NR1H2P55055 460 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 CSNK2A1P68400 391 aaPredicted RBP15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 PLAURQ03405 335 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 FOXD4Q12950 439 aaPredicted RBP15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 SYPL1Q16563 259 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 SYT14P1Q58G82 188 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 C20orf204Q6ZNR8 217 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 GRINAQ7Z429 371 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 MAVSQ7Z434 540 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 ARFGAP2Q8N6H7 521 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 ZNF563Q8TA94 476 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 HS3ST6Q96QI5 342 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 DLL4Q9NR61 685 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 CHRNA9Q9UGM1 479 aa15.94■□□□□ 0.14
CHMP2A-203ENST00000597209 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 FAAHO00519 579 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 UBDO15205 165 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 GSNP06396 782 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 CHRM4P08173 479 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 RPS4Y1P22090 263 aaKnown RBP15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 HTR3AP46098 478 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 DIO1P49895 249 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 RASGEF1BQ0VAM2 473 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 GNA13Q14344 377 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 P2RY6Q15077 328 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 PDK3Q15120 406 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 SFRP5Q5T4F7 317 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 SHEQ5VZ18 495 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 RMND5AQ9H871 391 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 CTPS2Q9NRF8 586 aa15.93■□□□□ 0.14
CHMP2A-203ENST00000597209 RAI1Q7Z5J4 1906 aaPredicted RBP15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 IGHV3-15A0A0B4J1V0 119 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 CLDN24A6NM45 220 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 SULT2B1O00204 365 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 DNPH1O43598 174 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 PMS2P2O95744 297 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 DBIP07108 87 aaKnown RBP15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 RYKP34925 604 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 OR3A2P47893 321 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 MVDP53602 400 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 COX20Q5RI15 118 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 EPGNQ6UW88 154 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 Q6ZT83 130 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 MTDHQ86UE4 582 aaKnown RBP15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 ADGRG3Q86Y34 549 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 WDR60Q8WVS4 1066 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 CNOT9Q92600 299 aaKnown RBP15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 C7orf26Q96N11 449 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 OR52B2Q96RD2 323 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 HDGFL3Q9Y3E1 203 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 USH1CQ9Y6N9 552 aa15.92■□□□□ 0.14
CHMP2A-203ENST00000597209 IGKV3D-15A0A087WSY6 115 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ZNF814B7Z6K7 855 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ARHGEF9O43307 516 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ADAM11O75078 769 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 CNOT4O95628 575 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 FESP07332 822 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 NR2F1P10589 423 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 IL7RP16871 459 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 MRPL19P49406 292 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 POLR2JP52435 117 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 MAP2K6P52564 334 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 NKX6-1P78426 367 aaPredicted RBP15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ITGADQ13349 1161 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 MAPK11Q15759 364 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ABLIM2Q6H8Q1 611 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 KRTAP1-3Q8IUG1 177 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 MIER2Q8N344 545 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 WFDC11Q8NEX6 87 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 HSD17B8Q92506 261 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 S100PBPQ96BU1 408 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ZHX1-C8orf76Q96EF9 292 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ITCHQ96J02 903 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 TMEM204Q9BSN7 226 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 UBTD1Q9HAC8 227 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 SLC6A13Q9NSD5 602 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 THUMPD1Q9NXG2 353 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 CALML5Q9NZT1 146 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 P2RX2Q9UBL9 471 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 TRAPPC4Q9Y296 219 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 DSPPQ9NZW4 1301 aa15.91■□□□□ 0.14
CHMP2A-203ENST00000597209 ZNF208O43345 1280 aa15.9■□□□□ 0.14
CHMP2A-203ENST00000597209 SMPD2O60906 423 aa15.9■□□□□ 0.14
CHMP2A-203ENST00000597209 TMCC2O75069 709 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms