RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PRPS2P11908 318 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 GGT1P19440 569 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 EFNA1P20827 205 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ENPP1P22413 925 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ME2P23368 584 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 CD40P25942 277 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 RPL3P39023 403 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 MANFP55145 182 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PRR5P85299 388 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 CHRNB3Q05901 458 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNHIT3Q15649 155 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 DECR1Q16698 335 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PLPPR5Q32ZL2 321 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PDSS1Q5T2R2 415 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 RINLQ6ZS11 566 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 OR7A2PQ8NGA2 310 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PPP1R36Q96LQ0 422 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 SORCS2Q96PQ0 1159 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PAIP2Q9BPZ3 127 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 INPP5KQ9BT40 448 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 CXorf36Q9H7Y0 433 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 Q9N2J8 555 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 EQTNQ9NQ60 294 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ASIC5Q9NY37 505 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 NTMQ9P121 344 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 ATP23Q9Y6H3 246 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 PMF1-BGLAPU3KQ54 211 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
SHKBP1-208ENST00000595726 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 A0A0G2JK05 382 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 GXYLT2A0PJZ3 443 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 M0R1B8 84 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 NDUFS8O00217 210 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 PGM3O95394 542 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 LAMP1P11279 417 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 DDX5P17844 614 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MAP3K8P41279 467 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 OR3A2P47893 321 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MAGOHP61326 146 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 EMX2Q04743 252 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 BST1Q10588 318 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MAD2L1Q13257 205 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 STX3Q13277 289 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MLC1Q15049 377 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 SMU1Q2TAY7 513 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MST1LQ2TV78 715 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 HHATQ5VTY9 493 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNF544Q6NX49 715 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 FCRLAQ7L513 359 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 SZRD1Q7Z422 152 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 RIMKLAQ8IXN7 391 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 KRTCAP2Q8N6L1 136 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 NUP43Q8NFH3 380 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 OR4C3Q8NH37 302 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 FAM110BQ8TC76 370 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 ZFAND2BQ8WV99 257 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 FBXO17Q96EF6 278 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 SH3YL1Q96HL8 342 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MS4A4EQ96PG1 132 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 METTL17Q9H7H0 456 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 SIRT3Q9NTG7 399 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 NOP53Q9NZM5 478 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 MGAT4BQ9UQ53 548 aa12.06□□□□□ -0.48
SHKBP1-208ENST00000595726 A0A087WZY1 265 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 NPIPA5A0A0B4J1W7 369 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 LOC390937A0A1W2PQ73 354 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 TTC36A6NLP5 189 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 NPIPA7E9PJI5 369 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 RAD51DO75771 328 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 NKX2-2O95096 273 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 NPIPA8P0DM63 369 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 G6PDP11413 515 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 BMP4P12644 408 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 PRPS1L1P21108 318 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 PTAFRP25105 342 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 SLC18A1P54219 525 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 PRKAG1P54619 331 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 CASP8Q14790 479 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 ZNF433Q8N7K0 673 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 CDRT4Q8N9R6 151 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 ATP6V1C2Q8NEY4 427 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 MGARPQ8TDB4 240 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 PIK3R3Q92569 461 aa12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-208ENST00000595726 ZBTB8AQ96BR9 441 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms