RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 STAC2Q6ZMT1 411 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 MSANTD1Q6ZTZ1 278 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 ITCHQ96J02 903 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 EBF4Q9BQW3 602 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 CCDC106Q9BWC9 280 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 TPT1P8Q9HAU6 139 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 TCF7L2Q9NQB0 619 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 P2RX2Q9UBL9 471 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 F8P00451 2351 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
SMG9-203ENST00000595700 AGAP5A6NIR3 686 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 BCHEP06276 602 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 THBDP07204 575 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 FESP07332 822 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ZCCHC18P0CG32 403 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 TFPIP10646 304 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 IL7RP16871 459 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 DIO1P49895 249 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 IDH3AP50213 366 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 DSTNP60981 165 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 STX1BP61266 288 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 RPS26P11Q5JNZ5 115 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 SLC2A7Q6PXP3 512 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 SLC25A43Q8WUT9 341 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 CHRNA9Q9UGM1 479 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 SPIN1Q9Y657 262 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 RAI1Q7Z5J4 1906 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 SULT2B1O00204 365 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 YES1P07947 543 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 CCNA2P20248 432 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 APOBEC1P41238 236 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 AQP5P55064 265 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 DEFB113Q30KQ7 82 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ZNF836Q6ZNA1 936 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 TMPPEQ6ZT21 453 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 HDXQ7Z353 690 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 CXorf67Q86X51 503 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 VRK2Q86Y07 508 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 SLC43A2Q8N370 569 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ZNF775Q96BV0 537 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 MBD6Q96DN6 1003 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ACTR6Q9GZN1 396 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 MTHFD2LQ9H903 347 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 GP6Q9HCN6 339 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 ING1Q9UK53 422 aaPredicted RBP13.13□□□□□ -0.31
SMG9-203ENST00000595700 MED13LQ71F56 2210 aa13.13□□□□□ -0.31
SMG9-203ENST00000595700 VPS13CQ709C8 3753 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 CYTIPO60759 359 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 GCM2O75603 506 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 TGDSO95455 350 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 PPP3CBP16298 524 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 CD53P19397 219 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 LOXP28300 417 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 CRISP3P54108 245 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 CSNK2A1P68400 391 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 GNA13Q14344 377 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 WFDC8Q8IUA0 241 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 ARL5BQ96KC2 179 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 CCDC28BQ9BUN5 200 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
SMG9-203ENST00000595700 PCDHB14Q9Y5E9 798 aa13.12□□□□□ -0.31
SMG9-203ENST00000595700 TMED7-TICAM2A0A0A6YYA0 188 aa13.11□□□□□ -0.31
SMG9-203ENST00000595700 NR5A2O00482 541 aa13.11□□□□□ -0.31
SMG9-203ENST00000595700 TFPTP0C1Z6 253 aa13.11□□□□□ -0.31
SMG9-203ENST00000595700 PSMB1P20618 241 aaKnown RBP13.11□□□□□ -0.31
SMG9-203ENST00000595700 EDNRAP25101 427 aa13.11□□□□□ -0.31
SMG9-203ENST00000595700 MAGEA8P43361 318 aa13.11□□□□□ -0.31
SMG9-203ENST00000595700 MRPL19P49406 292 aaKnown RBP13.11□□□□□ -0.31
SMG9-203ENST00000595700 EPS8Q12929 822 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms