RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ZNF610Q8N9Z0 462 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 ATP6V1C2Q8NEY4 427 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 GTF2H4Q92759 462 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 VPS33AQ96AX1 596 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 ZHX1-C8orf76Q96EF9 292 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 MED18Q9BUE0 208 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 OR10A4Q9H209 315 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 CHRNA9Q9UGM1 479 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 TRIM33Q9UPN9 1127 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 CORO2BQ9UQ03 480 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 DSPPQ9NZW4 1301 aa15.85■□□□□ 0.13
SHKBP1-204ENST00000594862 THBS1P07996 1170 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 ENPP1P22413 925 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 DNAJA1P31689 397 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 FAM27E3Q08E93 113 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 LARS2Q15031 903 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 SPDL1Q96EA4 605 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 OR5B2Q96R09 309 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 EBF4Q9BQW3 602 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 CCDC106Q9BWC9 280 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 SRXN1Q9BYN0 137 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 QRSL1Q9H0R6 528 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 SLC6A13Q9NSD5 602 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 MRGBPQ9NV56 204 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 ITGB1BP2Q9UKP3 347 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 HDGFL3Q9Y3E1 203 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 HEATR5AQ86XA9 2040 aa15.84■□□□□ 0.13
SHKBP1-204ENST00000594862 A0A0G2JPF8 293 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 CFAP73A6NFT4 308 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 HNRNPCL2B2RXH8 293 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 HNRNPCL3B7ZW38 293 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 CLIC1O00299 241 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 NR5A2O00482 541 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 HNRNPCL1O60812 293 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 BCHEP06276 602 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 TFPTP0C1Z6 253 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 HNRNPCL4P0DMR1 293 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 BMP2P12643 396 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ETFAP13804 333 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 CD1EP15812 388 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 DNASE1P24855 282 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 RYKP34925 604 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 LRIF1Q5T3J3 769 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 MRPL2Q5T653 305 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 RNF220Q5VTB9 566 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 OR52P1PQ8NH57 321 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ABHD3Q8WU67 409 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 SLC38A5Q8WUX1 472 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ROBO4Q8WZ75 1007 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ZG16BQ96DA0 208 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 PAIP1Q9H074 479 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 BCO1Q9HAY6 547 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 A4GALTQ9NPC4 353 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 CCDC167Q9P0B6 97 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ST6GALNAC2Q9UJ37 374 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 CLEC4AQ9UMR7 237 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 ZNF232Q9UNY5 417 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 IFT52Q9Y366 437 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 PCDHB14Q9Y5E9 798 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 GMEB1Q9Y692 573 aa15.83■□□□□ 0.12
SHKBP1-204ENST00000594862 SULT2B1O00204 365 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 PMS2P2O95744 297 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 HRGP04196 525 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 YES1P07947 543 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 TFPIP10646 304 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 CCKARP32238 428 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 IDH2P48735 452 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 DIO1P49895 249 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 POLR2HP52434 150 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 RGNQ15493 299 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 EXOC3L2Q2M3D2 409 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 SLC2A7Q6PXP3 512 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 PAMR1Q6UXH9 720 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 SPNS3Q6ZMD2 512 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 TMPPEQ6ZT21 453 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 ZNF550Q7Z398 422 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 BBS10Q8TAM1 723 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 CNOT9Q92600 299 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 SLC35B4Q969S0 331 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 AURKBQ96GD4 344 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 USB1Q9BQ65 265 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 HDHD5Q9BXW7 423 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 BCL2L10Q9HD36 194 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 EMC3Q9P0I2 261 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 GPR52Q9Y2T5 361 aa15.82■□□□□ 0.12
SHKBP1-204ENST00000594862 A0A1W2PNR3 127 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 CDHR4A6H8M9 788 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 ZNF724A8MTY0 619 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 C5orf58C9J3I9 102 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 ZNF208O43345 1280 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 CYTIPO60759 359 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 EDF1O60869 148 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 C1QCP02747 245 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 CRYGSP22914 178 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 SLC1A3P43003 542 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 RIPPLY3P57055 190 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 COPZ1P61923 177 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 EPS8Q12929 822 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 PDK3Q15120 406 aa15.81■□□□□ 0.12
SHKBP1-204ENST00000594862 GTDC1Q4AE62 458 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms