RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SLC17A7Q9P2U7 560 aa14.42□□□□□ -0.1
LIG1-205ENST00000593425 MKLN1Q9UL63 735 aa14.42□□□□□ -0.1
LIG1-205ENST00000593425 A0A1W2PR80 420 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 ZNF716A6NP11 495 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 E7EQL1 145 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 UBTFL6P0CB48 400 aaPredicted RBP14.41□□□□□ -0.1
LIG1-205ENST00000593425 MATN1P21941 496 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 NUDT6P53370 316 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 MERTKQ12866 999 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 SYT14P1Q58G82 188 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 AGAP6Q5VW22 663 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 B3GLCTQ6Y288 498 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 C6orf120Q7Z4R8 191 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 OR52N5Q8NH56 324 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 KIF18AQ8NI77 898 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 HTRA1Q92743 480 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 DNAJA3Q96EY1 480 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 RHNO1Q9BSD3 238 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 EML4Q9HC35 981 aaKnown RBP14.41□□□□□ -0.1
LIG1-205ENST00000593425 ZDHHC2Q9UIJ5 367 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 COL6A5A8TX70 2615 aa14.41□□□□□ -0.1
LIG1-205ENST00000593425 YLPM1P49750 1951 aaKnown RBP14.4□□□□□ -0.1
LIG1-205ENST00000593425 IGKV3D-15A0A087WSY6 115 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 SULT2B1O00204 365 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 BCAS1O75363 584 aaPredicted RBP14.4□□□□□ -0.1
LIG1-205ENST00000593425 STX11O75558 287 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 CSTAP01040 98 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 IFNA2P01563 188 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 G6PDP11413 515 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 PRPS1L1P21108 318 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 TTKP33981 857 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 NTF4P34130 210 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 ZNF83P51522 516 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 CASP9P55211 416 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 FOXG1P55316 489 aaPredicted RBP14.4□□□□□ -0.1
LIG1-205ENST00000593425 MAPK14Q16539 360 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 ARHGAP11BQ3KRB8 267 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 CHRFAM7AQ494W8 412 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 C6orf52Q5T4I8 152 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 FBXW9Q5XUX1 488 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 P2RY8Q86VZ1 359 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 HOMEZQ8IX15 550 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 OR10H5Q8NGA6 315 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 ARL8AQ96BM9 186 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 SLC35G5Q96KT7 338 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 PRPF18Q99633 342 aaKnown RBP14.4□□□□□ -0.1
LIG1-205ENST00000593425 ZNF350Q9GZX5 532 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 SERINC1Q9NRX5 453 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 CBLN4Q9NTU7 201 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 SLC25A15Q9Y619 301 aa14.4□□□□□ -0.1
LIG1-205ENST00000593425 RNF103-CHMP3A0A140T963 221 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 FAM234BA2RU67 622 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 SPAG7O75391 227 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 AK1P00568 194 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 PGCP20142 388 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 PGM1P36871 562 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 CSNK2A1P68400 391 aaPredicted RBP14.39□□□□□ -0.11
LIG1-205ENST00000593425 CHRNEQ04844 493 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 PDK3Q15120 406 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 TMEM249Q2WGJ8 235 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 OR4F3Q6IEY1 312 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 BHLHB9Q6PI77 547 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 SLC22A25Q6T423 547 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 TMEM108Q6UXF1 575 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 SSX8Q7RTT4 187 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 MTDHQ86UE4 582 aaKnown RBP14.39□□□□□ -0.11
LIG1-205ENST00000593425 UBE2J2Q8N2K1 259 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 FAM71CQ8NEG0 241 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 SLC25A43Q8WUT9 341 aaPredicted RBP14.39□□□□□ -0.11
LIG1-205ENST00000593425 TMEM234Q8WY98 164 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 APH1AQ96BI3 265 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 ARL5BQ96KC2 179 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 ADAD1Q96M93 576 aaKnown RBP14.39□□□□□ -0.11
LIG1-205ENST00000593425 DHRS9Q9BPW9 319 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 CCDC106Q9BWC9 280 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 OR51I1Q9H343 314 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 ACER3Q9NUN7 267 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 EMC3Q9P0I2 261 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 POU2F3Q9UKI9 436 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 NOSIPQ9Y314 301 aaKnown RBP14.39□□□□□ -0.11
LIG1-205ENST00000593425 ATRQ13535 2644 aa14.39□□□□□ -0.11
LIG1-205ENST00000593425 CIB4A0PJX0 185 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 TLDC2A0PJX2 215 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 DUXAA6NLW8 204 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 KIAA0513O60268 411 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 TFPIP10646 304 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 CD40P25942 277 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 PLAURQ03405 335 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 FUT5Q11128 374 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 PGS1Q32NB8 556 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 TYW3Q6IPR3 259 aaKnown RBP14.38□□□□□ -0.11
LIG1-205ENST00000593425 CLEC2AQ6UVW9 174 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 EIF3MQ7L2H7 374 aaKnown RBP14.38□□□□□ -0.11
LIG1-205ENST00000593425 MUC15Q8N387 334 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 ZNF525Q8N782 197 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 EIF1ADQ8N9N8 165 aaKnown RBP14.38□□□□□ -0.11
LIG1-205ENST00000593425 NANOS1Q8WY41 292 aaKnown RBP14.38□□□□□ -0.11
LIG1-205ENST00000593425 TUBGCP3Q96CW5 907 aa14.38□□□□□ -0.11
LIG1-205ENST00000593425 RADILQ96JH8 1075 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms