RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CPEB2Q7Z5Q1 589 aaKnown RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 GID4Q8IVV7 300 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 APCDD1LQ8NCL9 501 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 OR51A7Q8NH64 312 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 RHBDD1Q8TEB9 315 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 VMP1Q96GC9 406 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 SH3YL1Q96HL8 342 aaPredicted RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 SPSB2Q99619 263 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 LPAR4Q99677 370 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 MGLLQ99685 303 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 SLC19A3Q9BZV2 496 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 GPN3Q9UHW5 284 aaPredicted RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 NXT1Q9UKK6 140 aaKnown RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 ICAM5Q9UMF0 924 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 PPIEQ9UNP9 301 aaKnown RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 BAIAP2Q9UQB8 552 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 LSM2Q9Y333 95 aaKnown RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 COL27A1Q8IZC6 1860 aaPredicted RBP10.93□□□□□ -0.66
NPC1-214ENST00000593280 KMT2EQ8IZD2 1858 aa10.93□□□□□ -0.66
NPC1-214ENST00000593280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 ALG1L2C9J202 215 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 M0R3G1 203 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 NDUFB5O43674 189 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 AIREO43918 545 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 GDF9O60383 454 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 CSO75390 466 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 GADD45AP24522 165 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 SLC9A3P48764 834 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 RGS6P49758 472 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 CLK1P49759 484 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 VBP1P61758 197 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 C1DQ13901 141 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 TSTQ16762 297 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 NXNL2Q5VZ03 156 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 MRPL14Q6P1L8 145 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 TMEM205Q6UW68 189 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 ATG4DQ86TL0 474 aaPredicted RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 MARCH3Q86UD3 253 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 CPOQ8IVL8 374 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 NANOGP1Q8N7R0 232 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 PROKR2Q8NFJ6 384 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 ZNF563Q8TA94 476 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 NUBPLQ8TB37 319 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 NDNFQ8TB73 568 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 RPL3LQ92901 407 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 OTULINQ96BN8 352 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 MESP1Q9BRJ9 268 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 ENKD1Q9H0I2 346 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 FN3KQ9H479 309 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 WDR54Q9H977 334 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 MCCC2Q9HCC0 563 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 FGF20Q9NP95 211 aaPredicted RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 FBXO8Q9NRD0 319 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 CHCHD3Q9NX63 227 aaKnown RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 H2AFY2Q9P0M6 372 aaPredicted RBP10.92□□□□□ -0.66
NPC1-214ENST00000593280 CLEC2DQ9UHP7 191 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 HEATR5AQ86XA9 2040 aa10.92□□□□□ -0.66
NPC1-214ENST00000593280 TRBV11-1A0A0K0K1C0 115 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 LNP1A1A4G5 178 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 HTR3EA5X5Y0 456 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 OR6C70A6NIJ9 312 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 RIIAD1A6NNX1 92 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 HCRTR2O43614 444 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 SCO2O43819 266 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
NPC1-214ENST00000593280 OR7A10O76100 309 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 APOL3O95236 402 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 PPP1R3DO95685 299 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 KLK3P07288 261 aaPredicted RBP10.91□□□□□ -0.66
NPC1-214ENST00000593280 CCL4P13236 92 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 ZNF28P17035 718 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 HTR1FP30939 366 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 EVI2BP34910 448 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 GAS1P54826 345 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 NCS1P62166 190 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 FOXK2Q01167 660 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 EFR3AQ14156 821 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 SPHARQ15513 63 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 DBX2Q6ZNG2 339 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 BBS1Q8NFJ9 593 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 TNFRSF13CQ96RJ3 184 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 WDR77Q9BQA1 342 aaPredicted RBP10.91□□□□□ -0.66
NPC1-214ENST00000593280 LRFN3Q9BTN0 628 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 TMEM43Q9BTV4 400 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 TAPBPLQ9BX59 468 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 CMC2Q9NRP2 79 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
NPC1-214ENST00000593280 IGKV1D-42A0A075B6H8 117 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 C9J4A7 227 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 CCRL2O00421 344 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 SOCS6O14544 535 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 CLPXO76031 633 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 NDUFB2O95178 105 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 IGF2P01344 180 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 SCG5P05408 212 aa10.91□□□□□ -0.66
NPC1-214ENST00000593280 CDK4P11802 303 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms