RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 MALT1Q9UDY8 824 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 PYCARDQ9ULZ3 195 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 PTGDR2Q9Y5Y4 395 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 ATP6V1G2-DDX39BF2Z307 99 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 GPR171O14626 319 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 ITGA5P08648 1049 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 MYL2P10916 166 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 ZNF23P17027 643 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 DDX5P17844 614 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 CFPP27918 469 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 FOXG1P55316 489 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 NAA20P61599 178 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 TP53BP2Q13625 1128 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 SWI5Q1ZZU3 235 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 SYT14P1Q58G82 188 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 C9orf135Q5VTT2 229 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 CLEC6AQ6EIG7 209 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 FRMD7Q6ZUT3 714 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 SLC46A3Q7Z3Q1 461 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 WDR31Q8NA23 367 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 ZNF540Q8NDQ6 660 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 IFT81Q8WYA0 676 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 ST8SIA1Q92185 356 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 FMO2Q99518 471 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 TNFRSF12AQ9NP84 129 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 MYOZ1Q9NP98 299 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 SIRT3Q9NTG7 399 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 AMDHD2Q9Y303 409 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 KCNE3Q9Y6H6 103 aa17.18■□□□□ 0.34
PRKCSH-216ENST00000592445 ZNF716A6NP11 495 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 ESPNB1AK53 854 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 NPIPB9F8W1W9 429 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 KRT16P08779 473 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 CCT3P49368 545 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 SESN3P58005 492 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 RPL38P63173 70 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 MST1LQ2TV78 715 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 SPDYE7PQ495Y7 208 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 PDZK1Q5T2W1 519 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 ZNF572Q7Z3I7 529 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 R3HCC1LQ7Z5L2 792 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 ANKS4BQ8N8V4 417 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 OR52E4Q8NGH9 312 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 PIGXQ8TBF5 258 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 SLC25A43Q8WUT9 341 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 TMEM234Q8WY98 164 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 MTERF3Q96E29 417 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 UPB1Q9UBR1 384 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 MOKQ9UQ07 419 aa17.17■□□□□ 0.34
PRKCSH-216ENST00000592445 SERINC4A6NH21 518 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 NTF4P34130 210 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 RFTN2Q52LD8 501 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 CASP12Q6UXS9 341 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 ZYG11AQ6WRX3 759 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 C17orf78Q8N4C9 275 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 OR56A1Q8NGH5 318 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 DNAJA3Q96EY1 480 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 FCRL1Q96LA6 429 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 SOX7Q9BT81 388 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 BPESC1Q9GZL8 116 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 LAT2Q9GZY6 243 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 ADAM19Q9H013 955 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 HEATR1Q9H583 2144 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 SLC17A5Q9NRA2 495 aa17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 TMEFF2Q9UIK5 374 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 SPIN1Q9Y657 262 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-216ENST00000592445 LRP5LA4QPB2 252 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 G3V2L1 256 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 PGCP20142 388 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 GCAP28676 217 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 HPCAL1P37235 193 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 ASMTP46597 345 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 PRPS1P60891 318 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 TGFBR3Q03167 851 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 SKP2Q13309 424 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 KLHL24Q6TFL4 600 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 C1orf162Q8NEQ5 155 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 ACMSDQ8TDX5 336 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 ACER3Q9NUN7 267 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 GPATCH2Q9NW75 528 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 DCTN4Q9UJW0 460 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 FIS1Q9Y3D6 152 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 TENM1Q9UKZ4 2725 aa17.15■□□□□ 0.34
PRKCSH-216ENST00000592445 CSTAP01040 98 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 UBTFL6P0CB48 400 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 NEFHP12036 1026 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 SERPINF1P36955 418 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 MAGEA8P43361 318 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 SLC16A1P53985 500 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 CKAP4Q07065 602 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 GPR68Q15743 365 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 GALNTL6Q49A17 601 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 SYT10Q6XYQ8 523 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 SPATA19Q7Z5L4 167 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 CCDC103Q8IW40 242 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms