RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MAGEA3P43357 314 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 NKX2-1P43699 371 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 GNPDA1P46926 289 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 KHKP50053 298 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SERPINH1P50454 418 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 DNA2P51530 1060 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 NDST2P52849 883 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CLDN8P56748 225 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CCZ1BP86790 482 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CCZ1P86791 482 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 VLDLRP98155 873 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SP3Q02447 781 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SLAQ13239 276 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 BIKQ13323 160 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SNTB2Q13425 540 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 SPA17Q15506 151 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MEP1BQ16820 701 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ODF4Q2M2E3 257 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CDNFQ49AH0 187 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CRY2Q49AN0 593 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 IQCCQ4KMZ1 466 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 BEX5Q5H9J7 111 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MFSD14CQ5VZR4 134 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 LIPJQ5W064 366 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 UGT3A1Q6NUS8 523 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ULK3Q6PHR2 472 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 RBPMS2Q6ZRY4 209 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 LINC00299Q6ZSB3 139 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZBTB49Q6ZSB9 765 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SPATA19Q7Z5L4 167 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 PIGZQ86VD9 579 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CCDC60Q8IWA6 550 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZBTB8OSQ8IWT0 167 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 EID3Q8N140 333 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 BATF2Q8N1L9 274 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 C17orf78Q8N4C9 275 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CCNYQ8ND76 341 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZNF248Q8NDW4 579 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 OR10T2Q8NGX3 314 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 OR6X1Q8NH79 312 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 C9orf43Q8TAL5 461 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 BLOC1S5Q8TDH9 187 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 PIH1D2Q8WWB5 315 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TRUB1Q8WWH5 349 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 HPSE2Q8WWQ2 592 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 S100ZQ8WXG8 99 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 AP3S1Q92572 193 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MARC2Q969Z3 335 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 C10orf90Q96M02 699 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 FER1L6-AS2Q96M78 137 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MCCC1Q96RQ3 725 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 TEAD3Q99594 435 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 PRMT1Q99873 361 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZNF559Q9BR84 538 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 URM1Q9BTM9 101 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 BCL2L14Q9BZR8 327 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 DNTTIP1Q9H147 329 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 GOLPH3Q9H4A6 298 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 RNF41Q9H4P4 317 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 NARFLQ9H6Q4 476 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 RANBP3Q9H6Z4 567 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 AKIRIN1Q9H9L7 192 aaPredicted RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 WDR41Q9HAD4 459 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 HMG20AQ9NP66 347 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZNF302Q9NR11 478 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.07□□□□□ -1.92
VMP1-212ENST00000591782 FGF21Q9NSA1 209 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TREX1Q9NSU2 369 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 NRBP2Q9NSY0 501 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MED17Q9NVC6 651 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 C2orf42Q9NWW7 574 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SPHK1Q9NYA1 384 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 PLEK2Q9NYT0 353 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 IL20RAQ9UHF4 553 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 FBXW2Q9UKT8 454 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 GUCA1BQ9UMX6 200 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 FLVCR2Q9UPI3 526 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TP53TG5Q9Y2B4 290 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MRPS28Q9Y2Q9 187 aaKnown RBP3.07□□□□□ -1.92
VMP1-212ENST00000591782 SNX24Q9Y343 169 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 STARD10Q9Y365 291 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TMED3Q9Y3Q3 217 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 AP4S1Q9Y587 144 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 ZNF532Q9HCE3 1301 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 SALL1Q9NSC2 1324 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 VPS8Q8N3P4 1428 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TEX14Q8IWB6 1497 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 MAP3K1Q13233 1512 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 CFAP74Q9C0B2 1584 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 TRPM1Q7Z4N2 1603 aa3.07□□□□□ -1.92
VMP1-212ENST00000591782 A0A087X002 238 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 A0A1W2PPV4 95 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 SMCO3A2RU48 225 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 URADA6NGE7 173 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 CENPXA8MT69 81 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 A8MUA0 341 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 BHLHE40O14503 412 aa3.06□□□□□ -1.92
VMP1-212ENST00000591782 PTGESO14684 152 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms