RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 PIGFQ07326 219 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 FOXF2Q12947 444 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 DYRK1AQ13627 763 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 RCAN2Q14206 197 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 MOGQ16653 247 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 CCNYL2Q5T2Q4 361 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 ZDHHC20Q5W0Z9 365 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 TTC33Q6PID6 262 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 ZNF773Q6PK81 442 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 DNM1P46Q6ZS02 220 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 RNF165Q6ZSG1 346 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 CLVS1Q8IUQ0 354 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 RIMKLAQ8IXN7 391 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 DPP10Q8N608 796 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 ZBTB8BQ8NAP8 495 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 IPMKQ8NFU5 416 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 OR9I1Q8NGQ6 314 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 OR51Q1Q8NH59 317 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 POC1BQ8TC44 478 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 LRRC58Q96CX6 371 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 PPP1R36Q96LQ0 422 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 COPS8Q99627 209 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 LPAR4Q99677 370 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 BCL7BQ9BQE9 202 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 TUBB1Q9H4B7 451 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 CXorf21Q9HAI6 301 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 SH2D2AQ9NP31 389 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 ZNF629Q9UEG4 869 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-209ENST00000589941 KLK4Q9Y5K2 254 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 DNAJC15Q9Y5T4 150 aa6.98□□□□□ -1.29
SMAD4-209ENST00000589941 TRGV11A0A075B6L2 103 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ZNF860A6NHJ4 632 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SAC3D1A6NKF1 404 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SGK494L7N484 410 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 UPK1AO00322 258 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 STX16O14662 325 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 STX7O15400 261 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 CLOCKO15516 846 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 KERAO60938 352 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 COQ9O75208 318 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 NDUFS7O75251 213 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 RDH16O75452 317 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SULT1C4O75897 302 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PLAUP00749 431 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 EPOP01588 193 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 GABRA1P14867 456 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PORP16435 677 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 IL1RNP18510 177 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 BDKRB1P46663 353 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 STT3AP46977 705 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 AGTR2P50052 363 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ANXA11P50995 505 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 CASP9P55211 416 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 OR4D2P58180 307 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 GABARAPL2P60520 117 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PLOD1Q02809 727 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 COL10A1Q03692 680 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 EMX2Q04743 252 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 FOXO1Q12778 655 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PMS2P3Q13401 168 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 KHDC1LQ5JSQ8 128 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 AARS2Q5JTZ9 985 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ANKRD26P1Q6NSI1 321 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ZNF549Q6P9A3 640 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PLEKHM3Q6ZWE6 761 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SLC22A16Q86VW1 577 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 PLD3Q8IV08 490 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 DHRSXQ8N5I4 330 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 OR2A1Q8NGT9 310 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SGMS2Q8NHU3 365 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 FAM110BQ8TC76 370 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 LKAAEAR1Q8TD35 194 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 TMEM171Q8WVE6 324 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 TWIST2Q8WVJ9 160 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 TRUB1Q8WWH5 349 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ELMO1Q92556 727 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 POP5Q969H6 163 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SARAFQ96BY9 339 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 CCDC115Q96NT0 180 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 WFIKKN1Q96NZ8 548 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 MACROD1Q9BQ69 325 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 DPH7Q9BTV6 452 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 ACAT2Q9BWD1 397 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 DERL2Q9GZP9 239 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 SHARPINQ9H0F6 387 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 LIN28AQ9H9Z2 209 aaKnown RBP6.97□□□□□ -1.29
SMAD4-209ENST00000589941 TBC1D23Q9NUY8 699 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 USE1Q9NZ43 259 aa6.97□□□□□ -1.29
SMAD4-209ENST00000589941 IGHV4-30-2A0A087WSY4 118 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 TRGV5A0A0B4J1U4 118 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 TRBV11-1A0A0K0K1C0 115 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 M0QYG6 137 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 NR5A2O00482 541 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 EI24O14681 340 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 PIP5K1BO14986 540 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 SERPINB7O75635 380 aa6.96□□□□□ -1.3
SMAD4-209ENST00000589941 EPPINO95925 133 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms