RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 POMZP3Q6PJE2 187 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ATG4DQ86TL0 474 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-211ENST00000589753 NEIL3Q8TAT5 605 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 FAR1Q8WVX9 515 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 EXO5Q9H790 373 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 C12orf10Q9HB07 376 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 SERINC1Q9NRX5 453 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ARMC1Q9NVT9 282 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 RHCGQ9UBD6 479 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 RIMS3Q9UJD0 308 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 OSGIN1Q9UJX0 560 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ACAD8Q9UKU7 415 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 SLC7A7Q9UM01 511 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 SLC6A5Q9Y345 797 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ITPR1Q14643 2758 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ATMQ13315 3056 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 TMED7-TICAM2A0A0A6YYA0 188 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-211ENST00000589753 LINC01387J3KSC0 135 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 CHP2O43745 196 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 SUSD5O60279 629 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 HCN1O60741 890 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 PRSS23O95084 383 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 THY1P04216 161 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 THRBP10828 461 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 PNMTP11086 282 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 CHMP24386 653 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 CXCR1P25024 350 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 GFRA1P56159 465 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ST3GAL3Q11203 375 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 TRILQ7L0X0 811 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF605Q86T29 641 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ADGRG3Q86Y34 549 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 OFCC1Q8IZS5 231 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 STMN2Q93045 179 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 GPR137Q96N19 417 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ASF1BQ9NVP2 202 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 CHRNA9Q9UGM1 479 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 TMED7Q9Y3B3 224 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF337Q9Y3M9 751 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 TESMINQ9Y4I5 508 aa13.72□□□□□ -0.21
ATG4D-211ENST00000589753 SPIN1Q9Y657 262 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-211ENST00000589753 A0A087WUJ7 227 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 A0A1B0GVC2 190 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 H3BML4 177 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 HNRNPRO43390 633 aaKnown RBP13.71□□□□□ -0.21
ATG4D-211ENST00000589753 EFNA2O43921 213 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 TIPRLO75663 272 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 WISP2O76076 250 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 LYPD3O95274 346 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 CST1P01037 141 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.21
ATG4D-211ENST00000589753 CCNA2P20248 432 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 IL11P20809 199 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 MAP2K6P52564 334 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 SPIBQ01892 262 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 FOXD4Q12950 439 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-211ENST00000589753 SELENBP1Q13228 472 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 TRAM2Q15035 370 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 NHSL2Q5HYW2 709 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 MPP4Q96JB8 637 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 NMNAT1Q9HAN9 279 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-211ENST00000589753 PLSCR2Q9NRY7 297 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 AP4B1Q9Y6B7 739 aa13.71□□□□□ -0.21
ATG4D-211ENST00000589753 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 GADD45GO95257 159 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ACTL6AO96019 429 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 FCGR1AP12314 374 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 PEPDP12955 493 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 BMP7P18075 431 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 POU3F2P20265 443 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-211ENST00000589753 RRM2P31350 389 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 TDGF1P3P51864 188 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 SMIM11AP58511 58 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 RAC1P63000 192 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ELF3P78545 371 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-211ENST00000589753 OR2T5Q6IEZ7 315 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 LINC00114Q6XXX2 140 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 NKAIN4Q8IVV8 208 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 LILRA2Q8N149 483 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ATP6V1C2Q8NEY4 427 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 OR2T29Q8NH02 315 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ABTB1Q969K4 478 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-211ENST00000589753 DHRS1Q96LJ7 313 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms