RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 HPS1Q92902 700 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 KISS1RQ969F8 398 aaPredicted RBP5.35□□□□□ -1.55
VPS25-204ENST00000589577 OMA1Q96E52 524 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 C3orf30Q96M34 536 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 OR52B2Q96RD2 323 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 SNX18Q96RF0 628 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 SLC6A7Q99884 636 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 EBF4Q9BQW3 602 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 SORBS1Q9BX66 1292 aaKnown RBP5.35□□□□□ -1.55
VPS25-204ENST00000589577 C1QTNF5Q9BXJ0 243 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 HDHD5Q9BXW7 423 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 REEP4Q9H6H4 257 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 CXorf21Q9HAI6 301 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 NDE1Q9NXR1 346 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 PDP1Q9P0J1 537 aaPredicted RBP5.35□□□□□ -1.55
VPS25-204ENST00000589577 UTS2RQ9UKP6 389 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 USP22Q9UPT9 525 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
VPS25-204ENST00000589577 GLOD5A6NK44 160 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ZNF814B7Z6K7 855 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 NR5A2O00482 541 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 EBAG9O00559 213 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 SCAMP2O15127 329 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 SLITRK5O94991 958 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 GPR75O95800 540 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ADAP00813 363 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 AVPP01185 164 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 CSNK2A2P19784 350 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 GIFP27352 417 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 GALNSP34059 522 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 RASSF2P50749 326 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 FABP6P51161 128 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 POLR2JP52435 117 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 CHN2P52757 468 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 DSCR4P56555 118 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 NME5P56597 212 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 SRSF4Q08170 494 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 PLCXD2Q0VAA5 305 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 CYLC2Q14093 348 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 PTGR1Q14914 329 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 PPA1Q15181 289 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 TRIP10Q15642 601 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 CARTPTQ16568 116 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 SWI5Q1ZZU3 235 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 SPDYE7PQ495Y7 208 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 C6orf10Q5SRN2 563 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 RAET1LQ5VY80 246 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 HLA-DQA1Q5Y7H0 255 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ZNF544Q6NX49 715 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 MSANTD1Q6ZTZ1 278 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 NUFIP2Q7Z417 695 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 SZRD1Q7Z422 152 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 MAVSQ7Z434 540 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 PIGWQ7Z7B1 504 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 MTDHQ86UE4 582 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 STK32CQ86UX6 486 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 FADS6Q8N9I5 356 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 GFM2Q969S9 779 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 EXOSC8Q96B26 276 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 TESCQ96BS2 214 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ERP27Q96DN0 273 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ZNF764Q96H86 408 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 ITCHQ96J02 903 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ADGRG7Q96K78 797 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 FCRL1Q96LA6 429 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 OR52E6Q96RD3 313 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 JMJD8Q96S16 334 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 DUSP26Q9BV47 211 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 ITPAQ9BY32 194 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 OR10A5Q9H207 317 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 FANCFQ9NPI8 374 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 SDR39U1Q9NRG7 319 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 ACSS1Q9NUB1 689 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 FAM120CQ9NX05 1096 aaKnown RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 CCDC167Q9P0B6 97 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 GIMAP2Q9UG22 337 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 LEF1Q9UJU2 399 aaPredicted RBP5.34□□□□□ -1.55
VPS25-204ENST00000589577 CCL27Q9Y4X3 112 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 PCDHA9Q9Y5H5 950 aa5.34□□□□□ -1.55
VPS25-204ENST00000589577 WNK2Q9Y3S1 2297 aa5.34□□□□□ -1.56
VPS25-204ENST00000589577 LOC105371242A0A075B767 164 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 NPIPA5A0A0B4J1W7 369 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 TMEM247A6NEH6 219 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 SHISA8B8ZZ34 492 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 NPIPA7E9PJI5 369 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 ZNF195O14628 629 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 PIN1P1O15428 100 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 TMPRSS11DO60235 418 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 HNRNPCL1O60812 293 aaKnown RBP5.33□□□□□ -1.56
VPS25-204ENST00000589577 COQ9O75208 318 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 BCAS2O75934 225 aaPredicted RBP5.33□□□□□ -1.56
VPS25-204ENST00000589577 ATP5HO75947 161 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 LYZL6O75951 148 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 STAMBPO95630 424 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 KRT16P08779 473 aa5.33□□□□□ -1.56
VPS25-204ENST00000589577 SLC35E2P0CK97 266 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms