RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 DESI1Q6ICB0 168 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 LYPD8Q6UX82 237 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 C16orf47Q6ZP98 133 aaPredicted RBP11.02□□□□□ -0.64
CCBE1-203ENST00000589116 PTCHD4Q6ZW05 846 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 PPP1R32Q7Z5V6 425 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 MARCH3Q86UD3 253 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 TMPRSS12Q86WS5 348 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 OR5W2Q8NH69 310 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 PFN4Q8NHR9 129 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 BRIX1Q8TDN6 353 aaKnown RBP11.02□□□□□ -0.64
CCBE1-203ENST00000589116 UBE2FQ969M7 185 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 POLDIP3Q9BY77 421 aaKnown RBP11.02□□□□□ -0.64
CCBE1-203ENST00000589116 DUSP21Q9H596 190 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 EGLN3Q9H6Z9 239 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 MEPEQ9NQ76 525 aaPredicted RBP11.02□□□□□ -0.64
CCBE1-203ENST00000589116 TBC1D23Q9NUY8 699 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 CDC42EP2O14613 210 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SCO2O43819 266 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 XPNPEP2O43895 674 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 CDC40O60508 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF354AO60765 605 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 OR2J2O76002 312 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 TNFSF15O95150 251 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 HPP00738 406 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 IGFBP1P08833 259 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 CD82P27701 267 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SLC1A3P43003 542 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SUMO3P55854 103 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 FBXW4P57775 412 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 C17orf67Q0P5P2 114 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 DNASE1L3Q13609 305 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 NTRK2Q16620 822 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 TMEM201Q5SNT2 666 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SLC25A30Q5SVS4 291 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ATG4DQ86TL0 474 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 DND1Q8IYX4 353 aaKnown RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ARMC10Q8N2F6 343 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 OR52L1Q8NGH7 329 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF563Q8TA94 476 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SPACA9Q96E40 222 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ARSGQ96EG1 525 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 Q96MT0 163 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 NODALQ96S42 347 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 DPH1Q9BZG8 443 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 PLA2G12AQ9BZM1 189 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 RTN4RQ9BZR6 473 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 DSN1Q9H410 356 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 C20orf141Q9NUB4 165 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 CLN6Q9NWW5 311 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 PCDHGB6Q9Y5F9 930 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SNX5Q9Y5X3 404 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ELOA3DA6NLF2 546 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 EFCAB9A8MZ26 197 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 STMND1H3BQB6 276 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 KPNA4O00629 521 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ADAM10O14672 748 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 TERTO14746 1132 aaKnown RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 RAD1O60671 282 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 HCN1O60741 890 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 RCBTB2O95199 551 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 MAKP20794 623 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SLC9A3P48764 834 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 PCYT1AP49585 367 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SMN1Q16637 294 aaKnown RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ELOA3BQ3SY89 546 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 NADK2Q4G0N4 442 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SATL1Q86VE3 508 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 MEX3DQ86XN8 651 aaKnown RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 AMER2Q8N7J2 671 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF540Q8NDQ6 660 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ELOA3Q8NG57 546 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 OR2T33Q8NG76 320 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 OR8D4Q8NGM9 314 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 B4GALNT2Q8NHY0 566 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 FANK1Q8TC84 345 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SH3YL1Q96HL8 342 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 SLC38A2Q96QD8 506 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 TSSK6Q9BXA6 273 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 OR52D1Q9H346 318 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF160Q9HCG1 818 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 MED17Q9NVC6 651 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 PAK1IP1Q9NWT1 392 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 AASSQ9UDR5 926 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 YARS2Q9Y2Z4 477 aaKnown RBP11.01□□□□□ -0.65
CCBE1-203ENST00000589116 PCDHGB1Q9Y5G3 927 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
CCBE1-203ENST00000589116 AKAP13Q12802 2813 aa11□□□□□ -0.65
CCBE1-203ENST00000589116 SPAARA0A1B0GVQ0 90 aa11□□□□□ -0.65
CCBE1-203ENST00000589116 ENO4A6NNW6 628 aa11□□□□□ -0.65
CCBE1-203ENST00000589116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11□□□□□ -0.65
CCBE1-203ENST00000589116 PTGES3LE9PB15 166 aa11□□□□□ -0.65
CCBE1-203ENST00000589116 TP53I11O14683 189 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms