RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 OR2M7Q8NG81 312 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 TMEM239Q8WW34 195 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 MPP4Q96JB8 637 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 ADAM19Q9H013 955 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 KLF13Q9Y2Y9 288 aaPredicted RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 CACNA1AO00555 2505 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 A0A087WUJ7 227 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 WISP1O95388 367 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 PNMTP11086 282 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 PRKCAP17252 672 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 CXCR1P25024 350 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 DPP4P27487 766 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 DAPP51397 102 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 GRINAQ7Z429 371 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 ATG4DQ86TL0 474 aaPredicted RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 NRMQ8IXM6 262 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 EXTL1Q92935 676 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 C1GALT1C1Q96EU7 318 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 NPAS1Q99742 590 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 OSGIN1Q9UJX0 560 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 BOKQ9UMX3 212 aaPredicted RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 DMXL2Q8TDJ6 3036 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 IGF2RP11717 2491 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
NPC1-207ENST00000588867 A0A087WV48 116 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 SHISA8B8ZZ34 492 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 PIP5K1CO60331 668 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 NME2P1O60361 137 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 ALPLP05186 524 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 ANXA8P13928 327 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 NME2P22392 152 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 RFC3P40938 356 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 POLR2HP52434 150 aaKnown RBP13.16□□□□□ -0.3
NPC1-207ENST00000588867 AQP4P55087 323 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 PPP2R2BQ00005 443 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 TBR1Q16650 682 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 MBOAT2Q6ZWT7 520 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 GALNT5Q7Z7M9 940 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 ZADH2Q8N4Q0 377 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 PACRGLQ8N7B6 248 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 OR5M1Q8NGP8 315 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 TM9SF4Q92544 642 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 ZFP64Q9NPA5 681 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 DKKL1Q9UK85 242 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 RPH3AQ9Y2J0 694 aaPredicted RBP13.16□□□□□ -0.3
NPC1-207ENST00000588867 MED31Q9Y3C7 131 aa13.16□□□□□ -0.3
NPC1-207ENST00000588867 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
NPC1-207ENST00000588867 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 MKRN2OSH3BPM6 223 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 TRAPPC6AO75865 159 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 RFPL3SP0C7P2 107 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 IFNGR2P38484 337 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 HTR3AP46098 478 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 CD97P48960 835 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 UGT2B15P54855 530 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 DSCR4P56555 118 aaPredicted RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 FOXF1Q12946 379 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 PLPPR5Q32ZL2 321 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 ZNF770Q6IQ21 691 aaPredicted RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 TMEM178AQ8NBL3 297 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 PFN4Q8NHR9 129 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 PIGXQ8TBF5 258 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 RELTQ969Z4 430 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 C8orf4Q9NR00 106 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 KRT84Q9NSB2 600 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 LOC400499M0QZD8 3231 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 MITFO75030 526 aaPredicted RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 IFI30P13284 250 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 HK1P19367 917 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 IGFBP5P24593 272 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 RBM34P42696 430 aaKnown RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 MEOX1P50221 254 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 FOXK1P85037 733 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 ALDH6A1Q02252 535 aaKnown RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 FOXO1Q12778 655 aa13.15□□□□□ -0.3
NPC1-207ENST00000588867 ZIK1Q3SY52 487 aaPredicted RBP13.15□□□□□ -0.3
NPC1-207ENST00000588867 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms