RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SLC38A4Q969I6 547 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ZBTB8AQ96BR9 441 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 C3orf49Q96BT1 292 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 EPYCQ99645 322 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 FUZQ9BT04 418 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 MFRPQ9BY79 579 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 OAZ3Q9UMX2 235 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 B3GNT3Q9Y2A9 372 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ITPR1Q14643 2758 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 TRBV4-1A0A0J9YWV2 114 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 SAC3D1A6NKF1 404 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ELOA3DA6NLF2 546 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 CASQ2O14958 399 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 PNMTP11086 282 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 PRKCAP17252 672 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 HK1P19367 917 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 TCEA1P23193 301 aaKnown RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 TACR3P29371 465 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 SRD5A2P31213 254 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 DNAJA1P31689 397 aaKnown RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 EIF1P41567 113 aaKnown RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 MERTKQ12866 999 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 PLPPR5Q32ZL2 321 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ELOA3BQ3SY89 546 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 POMZP3Q6PJE2 187 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 Q6ZS92 163 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 NKAIN4Q8IVV8 208 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ZFP62Q8NB50 900 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ELOA3Q8NG57 546 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 MPP4Q96JB8 637 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 MRGPRX4Q96LA9 322 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ALPK1Q96QP1 1244 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 PRSS27Q9BQR3 290 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ZNF71Q9NQZ8 489 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 MAP1BP46821 2468 aaKnown RBP20.52■□□□□ 0.88
ACTN4-210ENST00000588618 CXCR1P25024 350 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 POLR2HP52434 150 aaKnown RBP20.52■□□□□ 0.88
ACTN4-210ENST00000588618 HMGA2P52926 109 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 SEC23BQ15437 767 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 TRIP10Q15642 601 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 EXOC3L2Q2M3D2 409 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 LINC00303Q3SY05 128 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 TBPL2Q6SJ96 375 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 ZDHHC13Q8IUH4 622 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 OR14L1PQ8NHC6 308 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 SLC7A13Q8TCU3 470 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 CIB1Q99828 191 aa20.52■□□□□ 0.88
ACTN4-210ENST00000588618 FAM166BA8MTA8 275 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 PDLIM1O00151 329 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 RASAL1O95294 804 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 RFPL3SP0C7P2 107 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 FPR1P21462 350 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 FOXF1Q12946 379 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 LRRC36Q1X8D7 754 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 RAET1LQ5VY80 246 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 ANKRD34AQ69YU3 496 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 C19orf48Q6RUI8 117 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 RBMXL3Q8N7X1 1067 aaKnown RBP20.51■□□□□ 0.87
ACTN4-210ENST00000588618 EME1Q96AY2 570 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF703Q9H7S9 590 aaPredicted RBP20.51■□□□□ 0.87
ACTN4-210ENST00000588618 C12orf10Q9HB07 376 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 RPH3AQ9Y2J0 694 aaPredicted RBP20.51■□□□□ 0.87
ACTN4-210ENST00000588618 PKD1L2Q7Z442 2459 aa20.51■□□□□ 0.87
ACTN4-210ENST00000588618 G3V2T6 193 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 PTNP21246 168 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 PPIAP62937 165 aaKnown RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF730Q6ZMV8 503 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 SVOPLQ8N434 492 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 OR5K1Q8NHB7 308 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ADAM19Q9H013 955 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 UBQLN3Q9H347 655 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 KRCC1Q9NPI7 259 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 STOML1Q9UBI4 398 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ADH6P28332 368 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 APOBEC1P41238 236 aaKnown RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 FOXK1P85037 733 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.5■□□□□ 0.879e-10■■□□□ 12.8
ACTN4-210ENST00000588618 OGFRL1Q5TC84 451 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 SHQ1Q6PI26 577 aaKnown RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 TTC33Q6PID6 262 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ATG4DQ86TL0 474 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 HIPK1Q86Z02 1210 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 ACOT11Q8WXI4 607 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-210ENST00000588618 HS6ST2Q96MM7 605 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 PIGQQ9BRB3 760 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 SERINC1Q9NRX5 453 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 OSGIN1Q9UJX0 560 aa20.5■□□□□ 0.87
ACTN4-210ENST00000588618 NBEAQ8NFP9 2946 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 A0A087WUJ7 227 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 SHISA8B8ZZ34 492 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 CCNB2O95067 398 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF24P17028 368 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 CCNA2P20248 432 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 PRKACGP22612 351 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 PTDSS1P48651 473 aaKnown RBP20.49■□□□□ 0.87
ACTN4-210ENST00000588618 HYAL4Q2M3T9 481 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 PODNL1Q6PEZ8 512 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 FAM109AQ8N4B1 249 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 LINC00471Q8N535 108 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms