RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KLHL15Q96M94 604 aa18.15■□□□□ 0.5
DDX39A-207ENST00000588542 PINK1Q9BXM7 581 aa18.15■□□□□ 0.5
DDX39A-207ENST00000588542 ARMC7Q9H6L4 198 aa18.15■□□□□ 0.5
DDX39A-207ENST00000588542 CTPS2Q9NRF8 586 aa18.15■□□□□ 0.5
DDX39A-207ENST00000588542 PLEKHB1Q9UF11 243 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-207ENST00000588542 ADGRG4Q8IZF6 3080 aa18.14■□□□□ 0.5
DDX39A-207ENST00000588542 HSPB2A8KAH6 182 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 M0QX08 132 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 RCBTB2O95199 551 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 IL2RAP01589 272 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 APOBEC1P41238 236 aaKnown RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 EIF1AXP47813 144 aaKnown RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 NUDT2P50583 147 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ZNF136P52737 540 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 CRYBA2P53672 197 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 RPS3AP61247 264 aaKnown RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 HSPB2Q16082 182 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 TMEM176BQ3YBM2 270 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 GKAP1Q5VSY0 366 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 C3orf33Q6P1S2 294 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 CCDC80Q76M96 950 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 CHMP1BQ7LBR1 199 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ZNF550Q7Z398 422 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ADGRG3Q86Y34 549 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ARMC8Q8IUR7 673 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ATP6V1C2Q8NEY4 427 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 CA5BP1Q8WTZ4 195 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 SLC35B4Q969S0 331 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 HOPXQ9BPY8 73 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ADAM19Q9H013 955 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 COQ10BQ9H8M1 238 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 ARL8BQ9NVJ2 186 aa18.14■□□□□ 0.49
DDX39A-207ENST00000588542 GMPR2Q9P2T1 348 aaKnown RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 SETXQ7Z333 2677 aaKnown RBP18.14■□□□□ 0.49
DDX39A-207ENST00000588542 PRORSD1PA6NEY8 169 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 SLC22A20A6NK97 555 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 FAM220BPB1ANY3 271 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 CXCL13O43927 109 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 SERPINB7O75635 380 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 OPN1SWP03999 348 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 SLC1A3P43003 542 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 PON3Q15166 354 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 HBMQ6B0K9 141 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 ARPINQ7Z6K5 226 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 PATL1Q86TB9 770 aaKnown RBP18.13■□□□□ 0.49
DDX39A-207ENST00000588542 FITM2Q8N6M3 262 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 FNDC9Q8TBE3 224 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 TM9SF2Q99805 663 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 WFDC6Q9BQY6 131 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 UCK2Q9BZX2 261 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 OSGIN1Q9UJX0 560 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 PRDM4Q9UKN5 801 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 ZNF175Q9Y473 711 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 KLF2Q9Y5W3 355 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-207ENST00000588542 CRYBG3Q68DQ2 2970 aa18.13■□□□□ 0.49
DDX39A-207ENST00000588542 NME4O00746 187 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 GRNP28799 593 aaKnown RBP18.12■□□□□ 0.49
DDX39A-207ENST00000588542 HTR3AP46098 478 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 CPA2P48052 419 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 SLC7A2P52569 658 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 HOXC5Q00444 222 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 FOXF2Q12947 444 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 VEZF1Q14119 521 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 SGCBQ16585 318 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 DUSP7Q16829 419 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 INTS11Q5TA45 600 aaKnown RBP18.12■□□□□ 0.49
DDX39A-207ENST00000588542 ERICH5Q6P6B1 374 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 SMYD1Q8NB12 490 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 CCDC197Q8NCU1 140 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 BHLHE22Q8NFJ8 381 aaPredicted RBP18.12■□□□□ 0.49
DDX39A-207ENST00000588542 GPR32P1Q8NGA4 272 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 OSTF1Q92882 214 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 TAMM41Q96BW9 452 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 SERINC1Q9NRX5 453 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 PAQR5Q9NXK6 330 aaPredicted RBP18.12■□□□□ 0.49
DDX39A-207ENST00000588542 CHRNA9Q9UGM1 479 aa18.12■□□□□ 0.49
DDX39A-207ENST00000588542 TMED7-TICAM2A0A0A6YYA0 188 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 A0A1W2PNR3 127 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 NKX2-6A6NCS4 301 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 GJE1A6NN92 205 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 FAM90A27PA6NNH2 459 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 AQP8O94778 261 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 TMIGD3P0DMS9 266 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-207ENST00000588542 UQCRBP14927 111 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 CD247P20963 164 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 CTSSP25774 331 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 HTR1EP28566 365 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 TACR3P29371 465 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 KCNJ5P48544 419 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 POLR2HP52434 150 aaKnown RBP18.11■□□□□ 0.49
DDX39A-207ENST00000588542 CARD18P57730 90 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 PDSS1Q5T2R2 415 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 WBP2NLQ6ICG8 309 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 P4HA3Q7Z4N8 544 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 GCNT2Q8N0V5 402 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 RELL2Q8NC24 303 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-207ENST00000588542 OR2T12Q8NG77 320 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 INTS12Q96CB8 462 aaKnown RBP18.11■□□□□ 0.49
DDX39A-207ENST00000588542 ZFP3Q96NJ6 502 aa18.11■□□□□ 0.49
DDX39A-207ENST00000588542 SRXN1Q9BYN0 137 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms