RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 KLHL21Q9UJP4 597 aa8.07□□□□□ -1.12
NEDD4L-221ENST00000588066 DIMT1Q9UNQ2 313 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-221ENST00000588066 EXOSC1Q9Y3B2 195 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-221ENST00000588066 SPTBP11277 2137 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SDK1Q7Z5N4 2213 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 COL5A1P20908 1838 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 TRIM64BA6NI03 449 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ENO4A6NNW6 628 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 KPNA4O00629 521 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SURF4O15260 269 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 IDH3BO43837 385 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CDC40O60508 579 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ICOSLGO75144 302 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 BCAS1O75363 584 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 GABARAPO95166 117 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 NDUFB2O95178 105 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 TIAF1O95411 115 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 HIST1H2ABP04908 130 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CDK4P11802 303 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 GP1BBP13224 206 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CD36P16671 472 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ZNF3P17036 446 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 MAKP20794 623 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ATP6V1E1P36543 226 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 HTR3AP46098 478 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CAPZA2P47755 286 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 MTNR1AP48039 350 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CLK1P49759 484 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CDH11P55287 796 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SUMO3P55854 103 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PRPS1P60891 318 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 EFNB1P98172 346 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CRYZQ08257 329 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 LGALS3BPQ08380 585 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SKP2Q13309 424 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CBFBQ13951 182 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 EXT1Q16394 746 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 C3orf38Q5JPI3 329 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CLEC12AQ5QGZ9 265 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PLA2G2CQ5R387 149 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 DCAF12Q5T6F0 453 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SLC30A6Q6NXT4 461 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 MRPL14Q6P1L8 145 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 KIRREL2Q6UWL6 708 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 C5orf46Q6UWT4 87 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SHISA6Q6ZSJ9 500 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 LANCL3Q6ZV70 420 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 HIST3H2AQ7L7L0 130 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CXXC5Q7LFL8 322 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 LNX2Q8N448 690 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PSD4Q8NDX1 1056 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 NFAM1Q8NET5 270 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PROKR2Q8NFJ6 384 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 OR8D4Q8NGM9 314 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 OR5W2Q8NH69 310 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PFN4Q8NHR9 129 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 TMEM234Q8WY98 164 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 HIST1H2ACQ93077 130 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CTRCQ99895 268 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 PLA2G12AQ9BZM1 189 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 FGF20Q9NP95 211 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SIGLEC7Q9Y286 467 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 CARD8Q9Y2G2 431 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 SLC6A5Q9Y345 797 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ZNF337Q9Y3M9 751 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 NPFFR2Q9Y5X5 522 aa8.06□□□□□ -1.12
NEDD4L-221ENST00000588066 ADAMTS9Q9P2N4 1935 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ASXL3Q9C0F0 2248 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 LOC102723996A0A087X1L8 192 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 TRBV11-1A0A0K0K1C0 115 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 PRR23D1E9PI22 279 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 M0R129 80 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 HCRTR2O43614 444 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 PTP4A3O75365 173 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 SLC25A12O75746 678 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 OR7A10O76100 309 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 SCGB1D2O95969 90 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 LCKP06239 509 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ZNF806P0C7X5 589 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 PRR23D2P0DMB1 279 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ADORA3P0DMS8 318 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 PEPDP12955 493 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 FUT1P19526 365 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 CXCR1P25024 350 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ACVR2AP27037 513 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ITPKBP27987 946 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 ABCD3P28288 659 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 MSX1P28360 303 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 NOS3P29474 1203 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 C21orf33P30042 268 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 HTR1FP30939 366 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 FOLR3P41439 243 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 SLC1A3P43003 542 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 P2RX1P51575 399 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 TUBA1BP68363 451 aa8.05□□□□□ -1.12
NEDD4L-221ENST00000588066 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms