RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 BRIX1Q8TDN6 353 aaKnown RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 PATE1Q8WXA2 126 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 AP3S1Q92572 193 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 HOXB13Q92826 284 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 KAT2AQ92830 837 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 FGF11Q92914 225 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 UCN3Q969E3 161 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 KISS1RQ969F8 398 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 SLC41A3Q96GZ6 507 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 LRR1Q96L50 414 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 ZNF582Q96NG8 517 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 OPALINQ96PE5 141 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 OR5M11Q96RB7 305 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 SDF2Q99470 211 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 MCHR1Q99705 422 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 MACROD1Q9BQ69 325 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 ZNF559Q9BR84 538 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 CHCHD6Q9BRQ6 235 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 CCDC32Q9BV29 185 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 SCNM1Q9BWG6 230 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 CDADC1Q9BWV3 514 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 RSPO3Q9BXY4 272 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 ZNF350Q9GZX5 532 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 NUAK2Q9H093 628 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 OR51E2Q9H255 320 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 FN3KQ9H479 309 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 ZBTB20Q9HC78 741 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 EQTNQ9NQ60 294 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 IL20Q9NYY1 176 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 DNAJC27Q9NZQ0 273 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 SELENONQ9NZV5 590 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 KLK13Q9UKR3 277 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 POMT2Q9UKY4 750 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 PLCL2Q9UPR0 1127 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 BAIAP2Q9UQB8 552 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 MRPS33Q9Y291 106 aaKnown RBP5.31□□□□□ -1.56
SDF2-206ENST00000587788 TRAPPC4Q9Y296 219 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 GSTK1Q9Y2Q3 226 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 CDH10Q9Y6N8 788 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 RNF215Q9Y6U7 377 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 SPTBN2O15020 2390 aa5.31□□□□□ -1.56
SDF2-206ENST00000587788 NUP214P35658 2090 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 IGHV1OR21-1A0A087WYE8 117 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 IQCMA0A1B0GVH7 501 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 TLCD2A6NGC4 264 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 UNC119BA6NIH7 251 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SLC9B1P1A6NJY1 282 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CPSF4LA6NMK7 179 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 ZNF670-ZNF695F2Z2N8 137 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 FAM227AF5H4B4 570 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CYR61O00622 381 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 DSCR3O14972 297 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 PRKYO43930 277 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CSO75390 466 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 PRKRAO75569 313 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 LDOC1O95751 146 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 GP1BAP07359 652 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 TSPAN19P0C672 248 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CKMT1AP12532 417 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CD53P19397 219 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 NT5EP21589 574 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CFL1P23528 166 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 CD1CP29017 333 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 HTR1FP30939 366 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 FGF9P31371 208 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 GALNSP34059 522 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 GRK5P34947 590 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 RBM34P42696 430 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 CRYBB2P43320 205 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 OMPP47874 163 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 AVPR1BP47901 424 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CD97P48960 835 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 PPM1FP49593 454 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 MAZP56270 477 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 EEF1A1P68104 462 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 POU6F2P78424 691 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 E2F1Q01094 437 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 BDH1Q02338 343 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 DUSP2Q05923 314 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ACSM1Q08AH1 577 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ATP1A4Q13733 1029 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 GRM7Q14831 915 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 LTB4RQ15722 352 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SSX1Q16384 188 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 PGGHGQ32M88 737 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ZNF750Q32MQ0 723 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 DCST2Q5T1A1 773 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 AGAP7PQ5VUJ5 663 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 NXNL2Q5VZ03 156 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 TYW3Q6IPR3 259 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 ACSM5Q6NUN0 579 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ZNF613Q6PF04 617 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 DHRS13Q6UX07 377 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 HSDL2Q6YN16 418 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 TMPRSS11AQ6ZMR5 421 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CCDC190Q86UF4 302 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 VRK2Q86Y07 508 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms