RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 OR5M10Q6IEU7 315 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 SHQ1Q6PI26 577 aaKnown RBP11.74□□□□□ -0.53
TRIM47-202ENST00000585333 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 ZNF730Q6ZMV8 503 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 GDF7Q7Z4P5 450 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.74□□□□□ -0.53
TRIM47-202ENST00000585333 LACC1Q8IV20 430 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 LSM14AQ8ND56 463 aaKnown RBP11.74□□□□□ -0.53
TRIM47-202ENST00000585333 OR4D11Q8NGI4 311 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 OR5K1Q8NHB7 308 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 GNRHR2Q96P88 292 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 RTN4RQ9BZR6 473 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 UBQLN3Q9H347 655 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 ZNF556Q9HAH1 456 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 DEPPQ9NTK1 212 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 PAQR5Q9NXK6 330 aaPredicted RBP11.74□□□□□ -0.53
TRIM47-202ENST00000585333 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 FBXL2Q9UKC9 423 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 SLC7A7Q9UM01 511 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 VDAC3Q9Y277 283 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 MED31Q9Y3C7 131 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 TESMINQ9Y4I5 508 aa11.74□□□□□ -0.53
TRIM47-202ENST00000585333 DSPP15924 2871 aaKnown RBP11.74□□□□□ -0.53
TRIM47-202ENST00000585333 C2orf72A6NCS6 295 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 A8MVM7 634 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 G3V2T6 193 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 H0Y3Z8 333 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 H3BNX3 289 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 CCNB2O95067 398 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ACTL6AO96019 429 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ANXA8P13928 327 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ZNF23P17027 643 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 CDH2P19022 906 aaPredicted RBP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 HTR2AP28223 471 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ALDH6A1Q02252 535 aaKnown RBP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 PLAURQ03405 335 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 SLC34A1Q06495 639 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 SF3B4Q15427 424 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 LINC00303Q3SY05 128 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ANKDD1AQ495B1 522 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 IQCCQ4KMZ1 466 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 SLC6A19Q695T7 634 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ATG4DQ86TL0 474 aaPredicted RBP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 RBM45Q8IUH3 476 aaKnown RBP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 RBMXL3Q8N7X1 1067 aaKnown RBP11.73□□□□□ -0.53
TRIM47-202ENST00000585333 OR6S1Q8NH40 331 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 TMEM239Q8WW34 195 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 EME1Q96AY2 570 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 SFXN2Q96NB2 322 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 PSD2Q9BQI7 771 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 LYVE1Q9Y5Y7 322 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
TRIM47-202ENST00000585333 TMED7-TICAM2A0A0A6YYA0 188 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 OIP5O43482 229 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 DNPH1O43598 174 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 SUSD5O60279 629 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 AHSA1O95433 338 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 NTN1O95631 604 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 ATP6V1G2O95670 118 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 MT-ATP6P00846 226 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 MT-ND1P03886 318 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 GSTM3P21266 225 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 YAP1P46937 504 aaKnown RBP11.72□□□□□ -0.53
TRIM47-202ENST00000585333 RNF144AP50876 292 aaPredicted RBP11.72□□□□□ -0.53
TRIM47-202ENST00000585333 RAC1P63000 192 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 HOXC5Q00444 222 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 FOXF1Q12946 379 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 BCL2A1Q16548 175 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 MICAQ29983 383 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 RFX4Q33E94 735 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 KRTCAP3Q53RY4 240 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 ARSKQ6UWY0 536 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 SLC43A2Q8N370 569 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 PACRGLQ8N7B6 248 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 FAM83FQ8NEG4 500 aaPredicted RBP11.72□□□□□ -0.53
TRIM47-202ENST00000585333 GIPC3Q8TF64 312 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 HES7Q9BYE0 225 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 POTEKPQ9BYX7 375 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 LDAHQ9H6V9 325 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 EXO5Q9H790 373 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 ZDHHC11Q9H8X9 412 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 TIGARQ9NQ88 270 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 KIF17Q9P2E2 1029 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 OSGIN1Q9UJX0 560 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 MGAT4BQ9UQ53 548 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 TMED7Q9Y3B3 224 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
TRIM47-202ENST00000585333 CNTRLQ7Z7A1 2325 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 TRAV36DV7A0A075B6V5 113 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms