RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SH3D21	A4FU49	640 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	EDF1	O60869	148 aa	Known RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	PLG	P00747	810 aa	Predicted RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	BCHE	P06276	602 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	TFPT	P0C1Z6	253 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	BMP2	P12643	396 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	AGTR1	P30556	359 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	ADSL	P30566	484 aa	Predicted RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	SLC7A1	P30825	629 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	CD79B	P40259	229 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	CRAT	P43155	626 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	IRX1	P78414	480 aa	Predicted RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	FAM27E3	Q08E93	113 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	LRIF1	Q5T3J3	769 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	MRPL2	Q5T653	305 aa	Known RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	PLEKHM3	Q6ZWE6	761 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	MSRB3	Q8IXL7	192 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	ARFGAP2	Q8N6H7	521 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	ZNF610	Q8N9Z0	462 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	ATP6V1C2	Q8NEY4	427 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	SLC38A5	Q8WUX1	472 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	WDR60	Q8WVS4	1066 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	PMM1	Q92871	262 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	THOC1	Q96FV9	657 aa	Known RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	DACH2	Q96NX9	599 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	CCDC106	Q9BWC9	280 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	TIGAR	Q9NQ88	270 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	GLRX2	Q9NS18	164 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	PROCR	Q9UNN8	238 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	EMC9	Q9Y3B6	208 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	TESMIN	Q9Y4I5	508 aa		11.88	□□□□□ -0.51
SREBF1-223	ENST00000584760	DNHD1	Q96M86	4753 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	TRBV5-3	A0A0A0MS03	114 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760		A0A1W2PNR3	127 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	CDHR4	A6H8M9	788 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	CLIC1	O00299	241 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	AP3D1	O14617	1153 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	DBI	P07108	87 aa	Known RBP	11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	RYK	P34925	604 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	UGT2B10	P36537	528 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	CRISP3	P54108	245 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	CTBP2	P56545	445 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	MERTK	Q12866	999 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	FADD	Q13158	208 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	KEAP1	Q14145	624 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	RGN	Q15493	299 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	SYT14P1	Q58G82	188 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	PAGE3	Q5JUK9	113 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	FBXW10	Q5XX13	1052 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	GRINA	Q7Z429	371 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	ROBO4	Q8WZ75	1007 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	MBD6	Q96DN6	1003 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	TMEM19	Q96HH6	336 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	C18orf12	Q96KH6	178 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	NPHS2	Q9NP85	383 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	PLSCR4	Q9NRQ2	329 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	THUMPD1	Q9NXG2	353 aa	Known RBP	11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	ELOVL5	Q9NYP7	299 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	CALML5	Q9NZT1	146 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	SLAMF8	Q9P0V8	285 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	KLHL13	Q9P2N7	655 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	GMEB1	Q9Y692	573 aa		11.87	□□□□□ -0.51
SREBF1-223	ENST00000584760	FAAH	O00519	579 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	GOSR1	O95249	250 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RAF1	P04049	648 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	THBS1	P07996	1170 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	INHBB	P09529	407 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	NUDT7	P0C024	238 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	PABPC4L	P0CB38	370 aa	Known RBP	11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	POU2F1	P14859	743 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	IL7R	P16871	459 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	ENPP1	P22413	925 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	APOBEC1	P41238	236 aa	Known RBP	11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RAC3	P60763	192 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	GNA13	Q14344	377 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RNPS1	Q15287	305 aa	Known RBP	11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	DEFB113	Q30KQ7	82 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	LIN52	Q52LA3	116 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	AGK	Q53H12	422 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RNF220	Q5VTB9	566 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	PAMR1	Q6UXH9	720 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	CLEC9A	Q6UXN8	241 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	ZNF836	Q6ZNA1	936 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	FCRLA	Q7L513	359 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	PEX5L	Q8IYB4	626 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	C10orf111	Q8N326	155 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	ZNF563	Q8TA94	476 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	OR5B2	Q96R09	309 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	SIKE1	Q9BRV8	207 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	SLC39A3	Q9BRY0	314 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RAD21L1	Q9H4I0	556 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	GP6	Q9HCN6	339 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	A4GALT	Q9NPC4	353 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	CTPS2	Q9NRF8	586 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	SERINC1	Q9NRX5	453 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	RLIM	Q9NVW2	624 aa		11.86	□□□□□ -0.51
SREBF1-223	ENST00000584760	VAPA	Q9P0L0	249 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms